RegulonDB RegulonDB 11.1: Operon Form

ypjD operon and associated TUs in Escherichia coli K-12 genome

Name: ypjD
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: ypjD
Gene(s): ypjD   Genome Browser M3D Gene expression COLOMBOS
Evidence: [COMP-AINF] Inferred computationally without human oversight

RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -11.7 2747684 2747715 cctccagcagCGCCATGCGCACTTCGCGCAGCGTATCTTTTacgttgtctt
  anti-terminator -7.0 2747650 2747693 ataaactcacGCACTACCGGCAGAGCTACGTCCGCCTCCAGCAGCGCCATGCGcacttcgcgc
  anti-anti-terminator -6.2 2747620 2747666 tgaccaaccgCTTTCTCTTTTACGCGATTGATAAACTCACGCACTACCGGCAGAGCtacgtccgcc
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"