RegulonDB RegulonDB 10.8: Operon Form
   

ypjB operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: ypjB
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: ypjB
Gene(s): ypjB   Genome Browser M3D Gene expression COLOMBOS
Note(s): Expression levels of cspI, ypjB, and yhjX genes were repressed by overproduction of YehT Kraxenberger T,2012 Insomuch as all of these genes lack any LytTR-like sequence motif, it is probable that the effect of YehT on these genes is indirect Kraxenberger T,2012
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: ypjBp
+1: 2784818
Distance from start of the gene: 389
Sequence: catcagagacgtatcgcggtgctcttgaaactttacaaaaaatgatgtctgaatgtatatAtcaagaaggcaacgcctttg
Note(s): The transcription start site for ypjBp was determined by 5-RACE; however, the experimental data were not provided in the report Kraxenberger T,2012
Evidence: [TIM]
Reference(s): [1] Kraxenberger T., et al., 2012


Evidence    

 [TIM] Transcription initiation mapping


Reference(s)    

 [1] Kraxenberger T., Fried L., Behr S., Jung K., 2012, First insights into the unexplored two-component system YehU/YehT in Escherichia coli., J Bacteriol 194(16):4272-84

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