RegulonDB RegulonDB 10.8: Operon Form
   

yeeED operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: yeeED
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: yeeED
Gene(s): yeeD, yeeE   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: yeeEp
+1: 2085552
Distance from start of the gene: 27
Sequence: gttctaatttagagaatttggttattggtctgcattccaccagtcatgaataatttcctcAttaacattcatctggttaat
Evidence: [CV(RS-EPT-CBR)]
[HTIM]
[RS-EPT-CBR]
Reference(s): [1] Mendoza-Vargas A., et al., 2009
[2] Salgado H, et al., 2012


RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: reverse
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -21.3 2085646 2085686 ttctaataatAAACCGGAGTCGAATGAACATTTGGCTCCGGTTTTTTTATtcttttgtat
  anti-terminator -11.1 2085653 2085717 ccgcagtacgAAGACGTAGCATAATCATCTTTTCTAATAATAAACCGGAGTCGAATGAACATTTGGCTCCGGTTtttttattct
  anti-anti-terminator -5.6 2085715 2085743 tcaccaagagCTTCCGTAATCCGGTTCCGCAGTACGAAgacgtagcat
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"





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