RegulonDB RegulonDB 10.10: Operon Form
   

mlrA operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: mlrA
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: mlrA
Gene(s): mlrA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: mlrAp
+1: 2214840
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 26
Sequence: tagatgcacaaaaaacgggcaaaactacctggttcgcaaaactgcgtctaaagttaaaccGggacctcgcgagcaagggtg
                         -35                     -10        +1                   
Note(s): Regulation of the mlrAp promoter has been described Brown PK,2001. The mlrA gene is RpoS regulated in an avian pathogenic Escherichia coli strain Brown PK,2001.
Evidence: [HIPP]
[ICWHO]
[IEP]
[IHBCE]
[TIM]
Reference(s): [1] Brown PK., et al., 2001
[2] Huerta AM., et al., 2003
[3] Pesavento C., et al., 2012
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal FliZ repressor mlrAp 2214816 2214845 -10.0 acctggttcgCAAAACTGCGTCTAAAGTTAAACCGGGACCtcgcgagcaa nd [GEA], [BPP], [SM] [3], [4]


Transcription unit          
Name: mlrA
Gene(s): mlrA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: mlrAp2
+1: 2214840
Sigma Factor: Sigma38 Sigmulon
Distance from start of the gene: 26
Sequence: tagatgcacaaaaaacgggcaaaactacctggttcgcaaaactgcgtctaaagttaaaccGggacctcgcgagcaagggtg
                          -35               -10             +1                   
Note(s): Regulation of the mlrAp promoter has been described Brown PK,2001. The mlrA gene is RpoS regulated in an avian pathogenic Escherichia coli strain Brown PK,2001.
Evidence: [HIPP]
[ICWHO]
[IEP]
[IHBCE]
[TIM]
Reference(s): [1] Brown PK., et al., 2001
[2] Huerta AM., et al., 2003
[3] Pesavento C., et al., 2012
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal FliZ repressor mlrAp2 2214816 2214845 -10.0 acctggttcgCAAAACTGCGTCTAAAGTTAAACCGGGACCtcgcgagcaa nd [GEA], [BPP], [SM] [3], [4]





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