RegulonDB RegulonDB 10.6.3: Operon Form

ydiV operon and associated TUs in Escherichia coli K-12 genome

Name: ydiV
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Gene(s): ydiV   Genome Browser M3D Gene expression COLOMBOS
Note(s): The EAL domain protein encoded by ydiV is involved in the interaction between quorum-sensing system 1 (QS system 1) and QS system 2. QS system 1 consists of SdiA responding to signals generated by other microbial species, and QS system 2 is stimulated by the cyclic AMP (cAMP)-cAMP receptor protein (CRP protein) |CITS:[18560382]|.
Expression of sdiA and ydiV is inhibited by glucose. The effect of glucose on ydiV expression is not mediated by SdiA |CITS:[18560382]|.
Evidence: [ICWHO] Inferred computationally without human oversight
Name: ydiVp
+1: 1792087
Sigma Factor: Sigma24 Sigmulon
Distance from start of the gene: 67
Sequence: aaaggacccctgaaaaagtggttaacatggaacaaatgaaagttactccttctgtaattgTtatgtcttatggcctcatcc
                              -10                    -35    +1                   
Evidence: [AIPP]
Reference(s): [1] Gama-Castro S., et al., 2008
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal SdiA activator ydiVp 1792132 1792149 -53.0 gataatctaaAAAAAGGACCCCTGAAAAagtggttaac nd [AIBSCS], [BPP], [GEA] [2]