RegulonDB RegulonDB 11.2: Operon Form

yebE operon and associated TUs in Escherichia coli K-12 genome

Name: yebE
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: yebE
Gene(s): yebE   Genome Browser M3D Gene expression COLOMBOS
Note(s): Under NlpE outer membrane lipoprotein overexpression, the transcription of the yebE gene is increased by CpxR Raivio TL,2013
Evidence: [COMP-AINF] Inferred computationally without human oversight
Name: yebEp
+1: 1929732
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 25
Sequence: tgcgcatcttttgtctcgatatacattttctgacatcctcatccgctatgctacaggcacTaaaaatggttattgaggagc
                               -35                  -10     +1                   
Evidence: [COMP-AINF]
Reference(s): [1] Huerta AM., et al., 2003
[2] Yamamoto K., et al., 2006
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CpxR-phosphorylated activator yebEp 1929775 1929776 -44.0 tcttttgtctCgatatacatt nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] W [2], [3]