RegulonDB RegulonDB 10.9: Operon Form
   

pykA operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: pykA
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: pykA
Gene(s): pykA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: pykAp3
+1: 1937494
Sigma Factor: Sigma38 Sigmulon
Distance from start of the gene: 155
Sequence: attcagagataacttgaagcgggtcaaagaagcgctgaaggaatcgcgttttgataagcaGttacttaatttaagtgacga
                                                 -10        +1                   
Evidence: [HTTIM]
[RS-EPT-CBR]
Reference(s): [1] Mendoza-Vargas A., et al., 2009
[2] Olvera L., et al., 2009
[3] Salgado H, et al., 2012


Transcription unit       
Name: pykA
Gene(s): pykA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: pykAp2
+1: 1937494
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 155
Sequence: attcagagataacttgaagcgggtcaaagaagcgctgaaggaatcgcgttttgataagcaGttacttaatttaagtgacga
                                                 -10        +1                   
Evidence: [HTTIM]
[RS-EPT-CBR]
Reference(s): [1] Mendoza-Vargas A., et al., 2009
[2] Olvera L., et al., 2009
[3] Salgado H, et al., 2012


Transcription unit       
Name: pykA
Gene(s): pykA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: pykAp
+1: 1937544
Sigma Factor: Sigma38 Sigmulon
Distance from start of the gene: 105
Sequence: ttgataagcagttacttaatttaagtgacgatcgctaaaaacgactgtcactgtcctaatCttatacgacatccgaatgag
                                                -10         +1                   
Evidence: [HTTIM]
[RS-EPT-CBR]
Reference(s): [1] Mendoza-Vargas A., et al., 2009
[2] Olvera L., et al., 2009
[3] Salgado H, et al., 2012


Transcription unit       
Name: pykA
Gene(s): pykA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: pykAp1
+1: 1937544
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 105
Sequence: ttgataagcagttacttaatttaagtgacgatcgctaaaaacgactgtcactgtcctaatCttatacgacatccgaatgag
                                                -10         +1                   
Evidence: [HTTIM]
[RS-EPT-CBR]
Reference(s): [1] Mendoza-Vargas A., et al., 2009
[2] Olvera L., et al., 2009
[3] Salgado H, et al., 2012





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