RegulonDB RegulonDB 10.7: Operon Form
   

yecT operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: yecT
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Gene(s): yecT   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: yecTp
+1: 1961935
Distance from start of the gene: 37
Sequence: tggacatgccattgttttctcactgttggataagaggccagaagcgtaatatccggccccAgggaaacgataacggttgaa
Evidence: [TIM]
Reference(s): [1] Salscheider SL., et al., 2014
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal RcsB-BglJ activator yecTp 1961857 1961877 -68.5 ttattgccatCTAAATGTATTCTGAAAATGGacatgccatt nd [AIBSCS], [GEA] [1]


RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: forward
Evidence: [ICA] Inferred by computational analysis
Reference(s): [2] Merino E, et al., 2005
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -18.3 1961814 1961851 cgtgagagtgAAGCCTGATCAGGGTTAGCCGATCAGGCTTTTTTATTgccatctaaa
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"





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