RegulonDB RegulonDB 10.8: Operon Form
   

shiA operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: shiA
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: shiA
Gene(s): shiA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: shiAp
+1: 2053566
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 77
Sequence: ttgccgctaatcagccataaaatcatttgcagatgcgctctgtcgaggtagtctcataagGttcgtttatagatcgacggc
                           -35                   -10        +1                   
Evidence: [CV(RS-EPT-CBR)]
[CV(TIM)]
[HTIM]
[RS-EPT-CBR]
[TIM]
Reference(s): [1] Liu F., et al., 2018
[2] Prevost K., et al., 2007
[3] Salgado H, et al., 2012


Regulation by sRNA    
  Small RNA name (Regulator) Regulation type Mechanism Function Binding Sites Evidence Reference
LeftPos RightPos Sequence (RNA-strand)
  ryhB antisense translational regulation activator       [GEA]
[HIFS]
[IMP]
[2]
Notes: "The provided sequence is that of the RNA strand,i.e. 'U's are showed instead the 'T'"





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