|
|
| Operon |  |
|---|---|
| Name: | sokB |
| This page displays every known transcription unit of this operon and their known regulation. | |
| Name: | sokB |
| Gene(s): | sokB Genome Browser M3D Gene expression COLOMBOS |
| Evidence: | [COMP-AINF] Inferred computationally without human oversight [EXP-IDA-TRANSCRIPT-LEN-DETERMINATION] Length of transcript experimentally determined |
| Reference(s): | [1] Kawano M., et al., 2005 |
| Promoter | |
| Name: | sokBp |
| +1: | 1492119 |
| Sigma Factor: | Sigma70 Sigmulon |
| Distance from start of the gene: | 0 |
| Sequence: |
ggttgtgcttcatagcctttctccttgccggatggcgggtaagaggctaagatctgaattGctaggttcattcgttggcct -35 -10 +1 |
| Evidence: |
[COMP-HINF] [EXP-IDA-TRANSCRIPTION-INIT-MAPPING] |
| Reference(s): | [2] Pedersen K., et al., 1999 |
| RNA cis-regulatory element | |
|---|
| Regulation, transcriptional elongation | |
| Attenuator type: | Translational |
| Strand: | forward |
| Structure type | Energy | LeftPos | RightPos | Sequence (RNA-strand) | |
|---|---|---|---|---|---|
| terminator | -16.8 | 1492072 | 1492106 | gtgcttcataGCCTTTCTCCTTGCCGGATGGCGGGTAAGAGGCTaagatctgaa |
| Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos" |
| Reference(s) |
|
|---|---|
[COMP-HINF] Inferred by a human based on computational evidence