RegulonDB RegulonDB 10.8: Operon Form
   

ydgA operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: ydgA
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: ydgA
Gene(s): ydgA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: ydgAp
+1: 1689794
Distance from start of the gene: 58
Sequence: gtttacaacaagctgtaagagcttactgaaaaaattaacatctcttgctaagcttattaaAggcttataacaccttcaggc
Evidence: [CV(RS-EPT-CBR)]
[HTIM]
[RS-EPT-CBR]
Reference(s): [1] Mendoza-Vargas A., et al., 2009
[2] Salgado H, et al., 2012


RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Translational
Strand: forward
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -13.4 1689809 1689829 ataacaccttCAGGCGGCCAGTCCGCCTGAtttcatttta
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"





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