RegulonDB RegulonDB 11.1: Operon Form

gpt operon and associated TUs in Escherichia coli K-12 genome

Name: gpt
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit       
Name: gpt
Gene(s): gpt   Genome Browser M3D Gene expression COLOMBOS
Evidence: [EXP-IDA-BOUNDARIES-DEFINED] Boundaries of transcription experimentally identified
[EXP-IDA-TRANSCRIPT-LEN-DETERMINATION] Length of transcript experimentally determined
Reference(s): [1] Nuesch J., et al., 1984
Name: gptp
+1: 255914
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 63
Sequence: taaaaagacgcggactcatgtgaaatactggtttttagtgcgccagatctctataatctcGcgcaacctattttcccctcg
                         -35                        -10     +1                   
Note(s): We assigned a putative transcriptional start site to this promoter based on the observation that the majority of the promoters, whose transcriptional start sites were determined experimentally, present a distance of 6 nucleotides between the transcriptional start site and the -10 box Harley CB, Reynolds RP,1987.
Evidence: [COMP-AINF]
Reference(s): [2] Huerta AM., et al., 2003
[1] Nuesch J., et al., 1984
Type: rho-independent
Reference(s): [1] Nuesch J., et al., 1984