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Name: | argS |
Gene(s): | argS Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [ICWHO] Inferred computationally without human oversight [LTED] Length of transcript experimentally determined |
Reference(s): | [1] Eriani G., et al., 1989 |
Promoter | |
Name: | argSp |
+1: | 1960001 |
Sigma Factor: | Sigma70 Sigmulon |
Distance from start of the gene: | 61 |
Sequence: |
aaacggcaatacgccacgcgcacgttgctgacgaaaacagccatttgcagtatactcccgCcctaatttctttaactggtg -35 -10 +1 |
Note(s): | Similarity to the consensus sequence of the set of known functional promoters for this sigma factor with strong experimental evidence: high homology. Score: 4.434. P-value: 1.086e-5 |
Evidence: |
[ICWHO] [TIM] |
Reference(s): |
[1] Eriani G., et al., 1989 [2] Huerta AM., et al., 2003 |
Terminator(s) | |
Type: | rho-independent |
Sequence: | tgagagtgaaGCCTGATCAGGGTTAGCCGATCAGGCTtttttattgc |
Reference(s): | [1] Eriani G., et al., 1989 |
Evidence: | [GEA] Gene expression analysis |
Reference(s): | [3] Traxler MF., et al., 2008 |
RNA cis-regulatory element | ![]() |
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Regulation, transcriptional elongation | |
Attenuator type: | Transcriptional |
Strand: | forward |
Structure type | Energy | LeftPos | RightPos | Sequence (RNA-strand) | |
---|---|---|---|---|---|
terminator | -10.34 | 1959997 | 1960034 | cagtatactcCCGCCCTAATTTCTTTAACTGGTGCGGGCAATTTTTGctcgcttcat | |
anti-terminator | -8.7 | 1959958 | 1960001 | atacgccacgCGCACGTTGCTGACGAAAACAGCCATTTGCAGTATACTCCCGCcctaatttct | |
anti-anti-terminator | -12.1 | 1959924 | 1959975 | tcacgccgctTCTGATGCAATAGTGAAAACGGCAATACGCCACGCGCACGTTGCTGACGAAaacagccatt |
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos" |
Reference(s) |
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