Name: |
raiA |
Gene(s): |
raiA
Genome Browser
M3D Gene expression
COLOMBOS
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Note(s): |
Analysis of gene expression has proved that under NlpE lipoprotein overexpression, the presence of the protein CpxR causes increased transcription of the raiA gene; however, no DNA sequence related to the consensus DNA-binding site of CpxR has been identified in the regulatory region of the gene. Therefore, the effect of CpxR on raiA is probably indirect Raivio TL,2013 raiAp expression is increased during the transition from exponential- to stationary-phase growth 2181444. 11168583. Shimada T,2013 and decreased after σE induction, as observed in high-throughput analysis of gene expression Lacoux C,2020. |
Evidence: |
[ICWHO] Inferred computationally without human oversight |
Promoter |
|
Name: |
raiAp |
+1: |
2737104 |
Sigma Factor: |
Sigma32 Sigmulon |
Distance from start of the gene: |
50
|
Sequence: |
aaaagattcgttgacaaaaagtgacaaaattatgagattttcatcacacattttgacatcAggaacggtatgctgaattca
|
Evidence: |
[IDA] [IEP]
|
Reference(s): |
[1] Wade JT., et al., 2006
|
Terminator(s) |
|
Type: |
rho-independent |
Sequence: |
aagagtagtcCTTTATATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGCGtgaaaacagt |
Reference(s): |
[2] Feng CQ., et al., 2019 [3] Lesnik EA., et al., 2001
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