RegulonDB RegulonDB 10.6.3: Operon Form
   

gspAB operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: gspAB
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Synonym(s): gspAB
Gene(s): gspB, gspA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: gspAp3
+1: 3455495
Distance from start of the gene: 97
Sequence: attgggtgggttgtatattgacgttagtataaatagtattaatgccgcttgcatgaatcaAgcaaaatttatttatattag
Evidence: [TIM]
Reference(s): [1] Francetic O., et al., 2000


Transcription unit          
Synonym(s): gspAB
Gene(s): gspB, gspA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: gspAp2
+1: 3455510
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 112
Sequence: gttctaataaaatagattgggtgggttgtatattgacgttagtataaatagtattaatgcCgcttgcatgaatcaagcaaa
                          -10                       -35     +1                   
Evidence: [HIPP]
[TIM]
Reference(s): [1] Francetic O., et al., 2000
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
nd H-NS repressor gspAp2 nd nd nd nd nd [BPP], [GEA] [1]


Transcription unit          
Synonym(s): gspAB
Gene(s): gspB, gspA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: gspAp1
+1: 3455519
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 121
Sequence: acgatgtatgttctaataaaatagattgggtgggttgtatattgacgttagtataaatagTattaatgccgcttgcatgaa
                          -10                       -35     +1                   
Evidence: [HIPP]
[TIM]
Reference(s): [1] Francetic O., et al., 2000
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
nd H-NS repressor gspAp1 nd nd nd nd nd [BPP], [GEA] [1]


Transcription unit       
Name: gspAB
Synonym(s): gspA-pioO
Gene(s): gspB, gspA   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: gspAp4
+1: 3455634
Sigma Factor: Sigma24 Sigmulon
Distance from start of the gene: 236
Sequence: atggaaataattcacattaaaaataatcgaccctatgcttataaatataatcaatatattGatggcagcatctttattatg
                             -10                   -35      +1                   
Evidence: [AIPP]
[TIM]
Reference(s): [2] Rhodius VA., et al., 2005





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