RegulonDB RegulonDB 10.9: Operon Form
   

gpmM-envC-yibQ operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: gpmM-envC-yibQ
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: gpmM-envC-yibQ
Gene(s): gpmM, envC, yibQ   Genome Browser M3D Gene expression COLOMBOS
Note(s): The gpmM gene is upregulated by long-term (8 to 12 h) exposure of E. coli to some biocides 32385082.
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: gpmMp2
+1: 3785187
Sigma Factor: Sigma38 Sigmulon
Distance from start of the gene: 73
Sequence: gacgaaaaaaaagcgtaaatctggcatcggcttgccgcgagcggtcgtatattttgatctTcagaggctattttatcgatt
                                                -10         +1                   
Evidence: [HTTIM]
Reference(s): [1] Maciag A., et al., 2011


Transcription unit          
Name: gpmM-envC-yibQ
Gene(s): gpmM, envC, yibQ   Genome Browser M3D Gene expression COLOMBOS
Note(s): The gpmM gene is upregulated by long-term (8 to 12 h) exposure of E. coli to some biocides 32385082.
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: gpmMp
+1: 3785235
Distance from start of the gene: 25
Sequence: atattttgatcttcagaggctattttatcgattcagctgtagtaaaattacgcaaattttGactcttgagtatgaggttgt
Evidence: [HTTIM]
Reference(s): [2] Mendoza-Vargas A., et al., 2009
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal Cra repressor gpmMp 3785195 3785212 -31.5 cttcagaggcTATTTTATCGATTCAGCTGtagtaaaatt nd [AIBSCS], [GEA] [3]





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