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Name: | lpxT |
Gene(s): | lpxT Genome Browser M3D Gene expression COLOMBOS |
Note(s): | The lpxT transcript is more abundant and stable at low temperatures (28 o C) than at 37-42 o C Sciandrone B,2019. The RNase E appears to degrade the transcript at high temperatures. In Salmonella, the transcription of lpxT is induced by PhoP at low Mg2+ concentrations 29739882. |
Evidence: | [IEP] Inferred from expression pattern [LTED] Length of transcript experimentally determined |
Reference(s): |
[1] Li Z., et al., 2019 [2] Sciandrone B., et al., 2019 |
Promoter | |
Name: | lpxTp |
+1: | 2268826 |
Sigma Factor: | Sigma70 Sigmulon |
Distance from start of the gene: | 28 |
Sequence: |
atgccttgcagagcgcgctgttgaagcttcgtttagcgactaccgcgtaaggttgcctgcGtttttcagtaagataattag -10 +1 |
Note(s): | The lpxTp promoter is active in exponential phase and at low temperatures, and it is inactive during stationary phase Sciandrone B,2019. |
Evidence: |
[RE] [TIM] |
Reference(s): |
[1] Li Z., et al., 2019 [2] Sciandrone B., et al., 2019 |
Gene(s): | yeiR, lpxT Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [ICWHO] Inferred computationally without human oversight |
Reference(s) |
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