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| Operon |  |
|---|---|
| Name: | yeiR-lpxT |
| This page displays every known transcription unit of this operon and their known regulation. | |
| Name: | lpxT |
| Gene(s): | lpxT Genome Browser M3D Gene expression COLOMBOS |
| Note(s): | The lpxT transcript is more abundant and stable at low temperatures (28 o C) than at 37-42 o C Sciandrone B,2019. The RNase E appears to degrade the transcript at high temperatures. In Salmonella, the transcription of lpxT is induced by PhoP at low Mg2+ concentrations Hong X, Chen HD, Groisman EA,2018. |
| Evidence: | [IEP] Inferred from expression pattern [LTED] Length of transcript experimentally determined |
| Reference(s): |
[1] Li Z., et al., 2019 [2] Sciandrone B., et al., 2019 |
| Promoter | |
| Name: | lpxTp |
| +1: | 2268826 |
| Sigma Factor: | Sigma70 Sigmulon |
| Distance from start of the gene: | 28 |
| Sequence: |
atgccttgcagagcgcgctgttgaagcttcgtttagcgactaccgcgtaaggttgcctgcGtttttcagtaagataattag -10 +1 |
| Note(s): | The lpxTp promoter is active in exponential phase and at low temperatures, and it is inactive during stationary phase Sciandrone B,2019. |
| Evidence: |
[ICWHO] [RSE] [TIM] |
| Reference(s): |
[1] Li Z., et al., 2019 [2] Sciandrone B., et al., 2019 |
| Name: | yeiR-lpxT |
| Gene(s): | yeiR, lpxT Genome Browser M3D Gene expression COLOMBOS |
| Evidence: | [ICWHO] Inferred computationally without human oversight |
| Reference(s) |
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|---|---|
[ICWHO] Inferred computationally without human oversight