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| Operon |  |
|---|---|
| Name: | menFDHBCE |
| This page displays every known transcription unit of this operon and their known regulation. | |
| Name: | menFD-yfbB-menBCE |
| Gene(s): | menE, menC, menB, menH, menD, menF Genome Browser M3D Gene expression COLOMBOS |
| Note(s): | A potential RNA G-quadruplex structure, formed by guanine-rich sequences located in the coding sequence region of the gene, was identified for menF . This structure could regulate the expression of the gene, as observed for hemL gene expression Shao X, Zhang W, Umar MI, Wong HY, Seng Z, Xie Y, Zhang Y, Yang L, Kwok CK, Deng X,2020. |
| Reference(s): | [1] Sharma V., et al., 1996 |
| Name: | menBCE |
| Gene(s): | menE, menC, menB Genome Browser M3D Gene expression COLOMBOS |
| Reference(s): | [2] Sharma V., et al., 1992 |
| Name: | menD-yfbB-menBCE |
| Gene(s): | menE, menC, menB, menH, menD Genome Browser M3D Gene expression COLOMBOS |
| Promoter | |
| Name: | menDp |
| +1: | Unknown |
| Note(s): | Zaslaver et al. demonstrated in 2006, by means of a library of fluorescent transcription fusions, that this promoter can be transcribed in vitro Zaslaver A,2006. Based on this, a putative promoter was suggested, but the +1 site of the transcription initiation has not been determined, although there exists promoter activity. |
| Evidence: | [EXP-IEP] |
| Reference(s): | [3] Zaslaver A., et al., 2006 |
| RNA cis-regulatory element | |
|---|
| Regulation, transcriptional elongation | |
| Attenuator type: | Translational |
| Strand: | reverse |
| Structure type | Energy | LeftPos | RightPos | Sequence (RNA-strand) | |
|---|---|---|---|---|---|
| terminator | -9.0 | 2380642 | 2380673 | accccgtataATGTGAGGCTTTTAACAGGGAGAGGTCCGCGtgcaatcact |
| Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos" |
| Reference(s) |
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|---|---|
[EXP-IEP] Inferred from expression pattern