RegulonDB RegulonDB 10.8: Operon Form
   

yfgM operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: yfgM
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Name: yfGM
Gene(s): yfgM   Genome Browser M3D Gene expression COLOMBOS
Evidence: [IC] Inferred by curator
Promoter
Name: yfgMp3
+1: 2639370
Distance from start of the gene: 87
Sequence: cgttgctgtggtgctgggtgagtctgaagtggctaacggcacagcagtagtgaaggatttGcgctctggtgagcaaacggc
Evidence: [HTIM]
Reference(s): [1] Mendoza-Vargas A., et al., 2009


Transcription unit       
Name: yfgM
Gene(s): yfgM   Genome Browser M3D Gene expression COLOMBOS
Evidence: [IC] Inferred by curator
Promoter
Name: yfgMp2
+1: 2639402
Distance from start of the gene: 119
Sequence: cagtttgcccgtgctgataaatggggtgcccgcgttgctgtggtgctgggtgagtctgaaGtggctaacggcacagcagta
Evidence: [HTIM]
Reference(s): [1] Mendoza-Vargas A., et al., 2009


Transcription unit       
Name: yfgM
Gene(s): yfgM   Genome Browser M3D Gene expression COLOMBOS
Evidence: [IC] Inferred by curator
Promoter
Name: yfgMp1
+1: 2639433
Distance from start of the gene: 150
Sequence: gaccaaccacggcggcggcaactttaagaaacagtttgcccgtgctgataaatggggtgcCcgcgttgctgtggtgctggg
Evidence: [HTIM]
Reference(s): [1] Mendoza-Vargas A., et al., 2009


Evidence    

 [HTIM] High-throughput transcription initiation mapping


Reference(s)    

 [1] Mendoza-Vargas A., Olvera L., Olvera M., Grande R., Vega-Alvarado L., Taboada B., Jimenez-Jacinto V., Salgado H., Juarez K., Contreras-Moreira B., Huerta AM., Collado-Vides J., Morett E., 2009, Genome-wide identification of transcription start sites, promoters and transcription factor binding sites in E. coli., PLoS One 4(10):e7526

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