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Name: | rlmE-ftsH |
Synonym(s): | rrmJ-hflB |
Gene(s): | ftsH, rlmE Genome Browser M3D Gene expression COLOMBOS |
Note(s): | Based on ChIP-chip and consensus sequences (Virtual Footprint), a site of NsrR negatively controlling the ftsH gene has been identified Partridge JD,2009 The consensus sequence found for this gene is AAGATGCTGGAT, which lies in the intergenic region rlmE-ftsH. |
Evidence: | [LTED] Length of transcript experimentally determined |
Reference(s): |
[1] Herman C., et al., 1995 [2] Tomoyasu T., et al., 1993 |
Promoter | |
Name: | rlmEp2 |
+1: | 3327731 |
Sigma Factor: | Sigma32 Sigmulon |
Distance from start of the gene: | 67 |
Sequence: |
atcgtattttttgcttacgttgggattgaaaacgggtcattctaccgccatctcccatatAtcaccaaataggcgcgtaaa -35 -10 +1 |
Evidence: |
[AIBSCS] [AIPP] [HIPP] [ICWHO] [IDA] [IEP] [TIM] |
Reference(s): |
[1] Herman C., et al., 1995 [3] Huerta AM., et al., 2003 [4] Nonaka G., et al., 2006 [5] Wade JT., et al., 2006 |
Terminator(s) | |
Type: | rho-independent |
Sequence: | ttgataagaaAAAACCCCGGAGCACGCCCCGGGGTTTTcggtacaaat |
Reference(s): | [2] Tomoyasu T., et al., 1993 |
Name: | rlmE-ftsH |
Synonym(s): | rrmJ-hflB |
Gene(s): | ftsH, rlmE Genome Browser M3D Gene expression COLOMBOS |
Note(s): | Based on ChIP-chip and consensus sequences (Virtual Footprint), a site of NsrR negatively controlling the ftsH gene has been identified Partridge JD,2009 The consensus sequence found for this gene is AAGATGCTGGAT, which lies in the intergenic region rlmE-ftsH. |
Evidence: | [LTED] Length of transcript experimentally determined |
Reference(s): |
[1] Herman C., et al., 1995 [2] Tomoyasu T., et al., 1993 |
Promoter | |
Name: | rlmEp1 |
+1: | 3327760 |
Sigma Factor: | Sigma70 Sigmulon |
Distance from start of the gene: | 96 |
Sequence: |
ggtgctgtttttgtttagtactcagattcatcgtattttttgcttacgttgggattgaaaAcgggtcattctaccgccatc -35 -10 +1 |
Evidence: |
[HIPP] [ICWHO] [IHBCE] [TIM] |
Reference(s): |
[1] Herman C., et al., 1995 [3] Huerta AM., et al., 2003 |
Terminator(s) | |
Type: | rho-independent |
Sequence: | ttgataagaaAAAACCCCGGAGCACGCCCCGGGGTTTTcggtacaaat |
Reference(s): | [2] Tomoyasu T., et al., 1993 |
Reference(s) |
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