RegulonDB RegulonDB 10.10: Operon Form
   

glcC operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: glcC
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: glcC
Gene(s): glcC   Genome Browser M3D Gene expression COLOMBOS
Evidence: [LTED] Length of transcript experimentally determined
Reference(s): [1] Pellicer MT., et al., 1996
Promoter
Name: glcCp
+1: 3128206
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 66
Sequence: ccagctctgtgaccttgtcttggttaactcaatgttaaattgatgtaacataatcacttaCgtgatgtgcgtgttttgcga
                        -35                      -10        +1                   
Evidence: [HIPP]
[ICWHO]
[IHBCE]
[TIM]
Reference(s): [2] Huerta AM., et al., 2003
[3] Pellicer MT., et al., 1999
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CRP-cyclic-AMP activator glcCp 3128177 3128198 -18.5 ggttaactcaATGTTAAATTGATGTAACATAAtcacttacgt nd [GEA], [AIBSCS] [5]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal Cra repressor glcCp 3128193 3128210 -4.5 aattgatgtaACATAATCACTTACGTGAtgtgcgtgtt nd [GEA], [AIBSCS] [6]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote Fis repressor glcCp 3128079 3128093 -120.0 ctgcttctgtGAACAGTTATTAAGCgggcttttcg nd [GEA], [AIBSCS] [4]
proximal Fis repressor glcCp 3128109 3128123 -90.0 tttcgttttcGTCTATCTCTTTAGCtaccggtcag nd [GEA], [AIBSCS] [4]
proximal Fis repressor glcCp 3128133 3128147 -66.0 ctaccggtcaGACCATTTTTTTTCCagctctgtga nd [GEA], [AIBSCS] [4]
remote Fis repressor glcCp 3128270 3128284 72.0 cgaggtccggGAATGAAAGATGAACgtcgccctat nd [GEA], [AIBSCS] [4]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
remote GlcC-glycolate repressor glcCp 3128245 3128259 47.0 cagaaaaattGGTCCTACCTGTGCAcgaggtccgg nd [GEA], [BCE], [SM] [3]





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