RegulonDB RegulonDB 10.10: Operon Form

bdcA operon and associated TUs in Escherichia coli K-12 genome

Name: bdcA
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: bdcA
Gene(s): bdcA   Genome Browser M3D Gene expression COLOMBOS
Note(s): Based on transcription analysis with qRT-PCR and mutants, it was shown that BdcR (formerly YjgJ) is a negative regulator of the bdcA gene Ma Q,2011
Evidence: [ICWHO] Inferred computationally without human oversight
Name: bdcAp
+1: 4474064
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 11
Sequence: ttacaaaacctgttgacagaaagttaaaacagttttgtaatgcatgttacataataaatcAaggagtccttatgggcgctt
                        -35                       -10       +1                   
Evidence: [AIPP]
Reference(s): [1] Huerta AM., et al., 2003
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal NsrR repressor bdcAp 4474077 4474088 -18.0 aaacagttttGTAATGCATGTTacataataaa nd [GEA], [APIORCISFBSCS] [2]