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Name: | mntP |
Gene(s): | mntP Genome Browser M3D Gene expression COLOMBOS |
Note(s): | The reciprocal expression of mntP and mntS suggests negative regulation of mntP by the mntS transcript Waters LS,2011 |
Evidence: | [ICWHO] Inferred computationally without human oversight [LTED] Length of transcript experimentally determined |
Reference(s): | [1] Waters LS., et al., 2011 |
Promoter | |
Name: | mntPp |
+1: | 1905459 |
Sigma Factor: | Sigma70 Sigmulon |
Distance from start of the gene: | 229 |
Sequence: |
aagcaatgaaataatatattccaacagttgttttatattctcaaaatatgttaaggttgcGccctcatttggggagtagcc -35 -10 +1 |
Evidence: | [TIM] |
Reference(s): | [1] Waters LS., et al., 2011 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
remote | MntR | activator | mntPp | 1905265 | 1905286 | -183.5 | aataagttatGAATTTAGCCAAAGCTATGTTTagtgtatttt | nd | [APIORCISFBSCS], [CV(GEA)], [GEA] | [1] |
remote | MntR | activator | mntPp | 1905305 | 1905326 | -143.5 | tttaataatcAGACATAGCTTAGGCTATATTAcctcttccct | nd | [APIORCISFBSCS], [CV(GEA)], [GEA] | [1] |
RNA cis-regulatory element | ![]() |
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Regulation, transcriptional elongation | |
Attenuator type: | Translational |
Strand: | forward |
Structure type | Energy | LeftPos | RightPos | Sequence (RNA-strand) | |
---|---|---|---|---|---|
terminator | -9.6 | 1905641 | 1905674 | gcatgtttgcTGGGGGCGATGATGTGTTTTATGGATACCCCGGtcaggacatt |
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos" |