RegulonDB RegulonDB 10.7: Operon Form
   

ecpBCDE operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: ecpBCDE
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit       
Gene(s): ecpE, ecpD, ecpC, ecpB   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: matCp2
+1: 310076
Distance from start of the gene: 50
Sequence: gcatctggagcggcgacgttagcgtacagttcgacgcgacctggaccagttaatctctctGatgtaccagcaggggtagcc
Evidence: [HTIM]
Reference(s): [1] Mendoza-Vargas A., et al., 2009


Transcription unit       
Gene(s): ecpE, ecpD, ecpC, ecpB   Genome Browser M3D Gene expression COLOMBOS
Evidence: [ICWHO] Inferred computationally without human oversight
Promoter
Name: matCp1
+1: 310119
Distance from start of the gene: 93
Sequence: aatggtaccaccgcagtaacagattacagcactctaccggaaggcatctggagcggcgacGttagcgtacagttcgacgcg
Evidence: [HTIM]
Reference(s): [1] Mendoza-Vargas A., et al., 2009


RNA cis-regulatory element    
Regulation, transcriptional elongation  
Attenuator type: Transcriptional
Strand: reverse
Evidence: [ICA] Inferred by computational analysis
Reference(s): [2] Merino E, et al., 2005
  Structure type Energy LeftPos RightPos Sequence (RNA-strand)
  terminator -12.9 310043 310067 tgatgtaccaGCAGGGGTAGCCCCCCTGCTTTATtcctggacgg
  anti-terminator -8.1 310057 310088 acctggaccaGTTAATCTCTCTGATGTACCAGCAGGGGTAGcccccctgct
Notes: "The provided "Sequence" is that of the RNA strand, i.e. U's are shown instead of T's and regulators on the reverse strand will appear as the reverse complement of the sequence delimited by LeftPos-RigtPos"





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