RegulonDB RegulonDB 10.7: Operon Form
   

ldtB operon and associated TUs in Escherichia coli K-12 genome




Operon      
Name: ldtB
This page displays every known transcription unit of this operon and their known regulation.


Transcription unit          
Name: ldtB
Synonym(s): ybiS
Gene(s): ldtB   Genome Browser M3D Gene expression COLOMBOS
Evidence: [AISDTU] Automated inference that a single-gene directon is a transcription unit
Promoter
Name: ldtBp
+1: 855786
Distance from start of the gene: 42
Sequence: acacatctgatttcactgtgagctggaatgaacttataatgcgcttccaatactctaataTtctcaacccaatggcctgcc
Evidence: [HTIM]
Reference(s): [1] Raghavan R., et al., 2011
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CRP-cAMP activator ldtBp 855839 855861 -63.5 ccaaaggcaaAAAATGTGATTTCGTACACATCTgatttcactg nd [AIBSCS], [APIORCISFBSCS], [GEA] [1], [2], [3]
proximal CRP-cAMP repressor ldtBp 855839 855861 -63.5 ccaaaggcaaAAAATGTGATTTCGTACACATCTgatttcactg nd [AIBSCS], [APIORCISFBSCS], [GEA] [1], [2], [3]
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
nd Rob1 activator ldtBp nd nd nd nd nd [GEA] [4]
Note(s): 1Rob is a transcriptional regulator related to the increase in resistance to antibiotics and is expressed constitutively. Bennik et al. have shown that this regulator activates the transcription of the ybiS gene Bennik MH,20003Rob is a transcriptional regulator related to the increase in resistance to antibiotics and is expressed constitutively. Bennik et al. have shown that this regulator activates the transcription of the ybiS gene Bennik MH,2000





RegulonDB