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Name: | nimT |
Gene(s): | nimT Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [ICWHO] Inferred computationally without human oversight |
Promoter | |
Name: | nimTp |
+1: | 1875657 |
Distance from start of the gene: | 16 |
Sequence: |
atttgtcattttagcttgattcaacataacaataaaaacggtaaggtacagcctcgtttgTaacaatgagaagcatatgac |
Evidence: | [NAS] |
Reference(s): | [1] Ogasawara H., et al., 2015 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
proximal | NimR | repressor | nimTp | 1875574 | 1875595 | -73.0 | acctgtgcatCATTTTGTCCGAACTTAGCGATaatttgtcat | nd | [BPP], [CV(GEA)], [CV(GEA)], [CV(GEA/GS)], [CV(GEA/GS)], [GEA], [GS], [ICWHO] | [1], [2] |
proximal | NimR | repressor | nimTp | 1875623 | 1875637 | -27.5 | tgattcaacaTAACAATAAAAACGGtaaggtacag | nd | [BPP], [CV(GEA)], [CV(GEA)], [CV(GEA/GS)], [CV(GEA/GS)], [GEA], [GS], [ICWHO] | [1], [2] |
proximal | NimR | repressor | nimTp | 1875649 | 1875667 | 1.5 | aaggtacagcCTCGTTTGTAACAATGAGAagcatatgac | nd | [BPP], [CV(GEA)], [CV(GEA)], [CV(GEA/GS)], [CV(GEA/GS)], [GEA], [GS], [ICWHO] | [1], [2] |
Reference(s) |
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