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| Operon |  |
|---|---|
| Name: | dgcC |
| This page displays every known transcription unit of this operon and their known regulation. | |
| Name: | adrA | |||||||||
| Synonym(s): | yaiC | |||||||||
| Gene(s): | dgcC Genome Browser M3D Gene expression COLOMBOS | |||||||||
| Evidence: | [BTEI] Boundaries of transcription experimentally identified | |||||||||
| Reference(s): | [1] Brombacher E., et al., 2003 | |||||||||
| Promoter | ||||||||||
| Name: | adrAp | |||||||||
| +1: | 403687 | |||||||||
| Sigma Factor: | Sigma38 Sigmulon | |||||||||
| Distance from start of the gene: | 16 | |||||||||
| Sequence: |
tacgaaaatggctcacccgaaatatcatacttctgcctttagctccgtctctataatttgGgaaaattgtttctgaatgtt -35 -10 +1 |
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| Note(s): | The adrAp promoter has a -10 box perfectly matching the boxes for σ70 promoters, but it does not have a -35 box, which is consistent with the fact that it is a promoter that is activated Brombacher E,2003 . | |||||||||
| Evidence: |
[HIPP] [ICWHO] [IEP] [TIM] |
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| Reference(s): |
[1] Brombacher E., et al., 2003 [2] Huerta AM., et al., 2003 [3] Sommerfeldt N., et al., 2009 [4] Weber H., et al., 2006 |
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| Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence (Confirmed, Strong, Weak) | Reference(s) | |||
|---|---|---|---|---|---|---|---|---|---|---|
| LeftPos | RightPos | Central Rel-Pos | Sequence | |||||||
| proximal | CsgD | activator | adrAp | 403615 | 403629 | -65.5 | ctgatagtgcTAACGGGTGAGCTACgaaaatggct | nd | [GEA], [AIBSCS], [APIORCISFBSCS], [BPP], [SM] | [1], [5] |
| proximal | CsgD | activator | adrAp | 403635 | 403645 | -47.0 | gctacgaaaaTGGCTCACCCGaaatatcata | nd | [GEA], [AIBSCS], [SM] | [1] |
| Reference(s) |
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|---|---|
[HIPP] Human inference of promoter position