RegulonDB RegulonDB 10.10: Operon Form

mgtS operon and associated TUs in Escherichia coli K-12 genome

Name: mgtS
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: mgtS
Gene(s): mgtS   Genome Browser M3D Gene expression COLOMBOS
Evidence: [BTEI] Boundaries of transcription experimentally identified
[ICWHO] Inferred computationally without human oversight
[LTED] Length of transcript experimentally determined
Reference(s): [1] Moon K., et al., 2009
Name: mgtSp
+1: 1622588
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 58
Sequence: gaacacaataaagatttaattcagccttcgtttaggttacctctgctaatatctttctcaTtgagatgaaaattaaggtaa
                    -35                        -10          +1                   
Evidence: [ICWHO]
Reference(s): [2] Huerta AM., et al., 2003
[1] Moon K., et al., 2009
Type: rho-independent
Reference(s): [1] Moon K., et al., 2009
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence (Confirmed, Strong, Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal PhoP-phosphorylated activator mgtSp 1622545 1622561 -35.0 ataaagatttAATTCAGCCTTCGTTTAggttacctct nd [GEA], [APIORCISFBSCS] [1]