RegulonDB RegulonDB 11.1: Operon Form

efeU operon and associated TUs in Escherichia coli K-12 genome

Name: efeU
This page displays every known transcription unit of this operon and their known regulation.

Transcription unit          
Name: efeU
Gene(s): efeU   Genome Browser M3D Gene expression COLOMBOS
Note(s): Under NlpE outer membrane lipoprotein overexpression, the transcription of the efeU gene is decreased by CpxR Raivio TL,2013
Evidence: [COMP-AINF] Inferred computationally without human oversight
Name: efeUp
+1: 1081307
Sigma Factor: Sigma70 Sigmulon
Distance from start of the gene: 49
Sequence: ttataaacattccgcttgtgtttttctttgccgtaatgataatcgctatcactgcgatttActtttctttgcatagattga
Reference(s): [1] Yamamoto K., et al., 2006
TF binding sites (TFBSs)
Type Transcription factor Function Promoter Binding Sites Growth Conditions Evidence Confidence level (C: Confirmed, S: Strong, W: Weak) Reference(s)
LeftPos RightPos Central Rel-Pos Sequence
proximal CpxR-phosphorylated repressor efeUp 1081246 1081260 -54.5 ccaacatcatTTTATAAACATTCCGcttgtgtttt nd [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] W [1], [2]