![]() ![]() ![]() |
Name: | ubiT-yhbS | ||||||||||
Gene(s): | yhbS, ubiT Genome Browser M3D Gene expression COLOMBOS | ||||||||||
Evidence: | [COMP-AINF] Inferred computationally without human oversight | ||||||||||
Promoter | |||||||||||
Name: | ubiTp2 | ||||||||||
+1: | 3301301 | ||||||||||
Distance from start of the gene: | 25 | ||||||||||
Sequence: |
tcatatggaattgttgatttataccgctatgttatttttctgatatggcaaaataggatgAttgttgaaacagggagtaaa |
||||||||||
Evidence: |
[EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP] [RS-EPT-CBR] |
||||||||||
Reference(s): |
[1] Mendoza-Vargas A., et al., 2009 [2] Salgado H, et al., 2012 |
Type | Transcription factor | Function | Promoter | Binding Sites | Growth Conditions | Evidence | Confidence level (C: Confirmed, S: Strong, W: Weak) | Reference(s) | |||
---|---|---|---|---|---|---|---|---|---|---|---|
LeftPos | RightPos | Central Rel-Pos | Sequence | ||||||||
proximal | CsgD | repressor | ubiTp2 | 3301280 | 3301294 | 15.5 | atgattgttgAAACAGGGAGTAAAActcgtgttgg | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [3] |
proximal | CsgD | repressor | ubiTp2 | 3301307 | 3301321 | -12.5 | gttatttttcTGATATGGCAAAATAggatgattgt | nd | [EXP-IEP-GENE-EXPRESSION-ANALYSIS], [COMP-HINF-SIMILAR-TO-CONSENSUS], [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS] | W | [3] |
Name: | ubiT-yhbS |
Gene(s): | yhbS, ubiT Genome Browser M3D Gene expression COLOMBOS |
Evidence: | [COMP-AINF] Inferred computationally without human oversight |
Promoter | |
Name: | ubiTp1 |
+1: | 3301368 |
Distance from start of the gene: | 92 |
Sequence: |
tagttaaccttgctgcgacaatttttgatttaaggcagttaaagttgtattggtggtagcAgcaatttcatatggaattgt |
Evidence: | [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP] |
Reference(s): | [1] Mendoza-Vargas A., et al., 2009 |
Reference(s) |
![]() |
---|---|