RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [CpxR,-] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[CpxR,-] Regulatory phrases      

[CpxR,-] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [CpxR,-,-81]   ungp
    [CpxR,-,-54.5]   efeUp
    [CpxR,-,-37]   motRp
    [CpxR,-,-9]   tsrp1
    [CpxR,-,11]   bamEp
  [CpxR,-,-464] [CpxR,-,-255] [CpxR,-,8]   csgBp2
  [CpxR,-,-464] [CpxR,-,-255] [CpxR,-,8]   csgBp
  [CpxR,-,-429.5] [CpxR,-,-373] [CpxR,-,-93] [CpxR,-,-68.5]   ompFp2
  [CpxR,-,-429.5] [CpxR,-,-373] [CpxR,-,-93] [CpxR,-,-68.5]   ompFp
  [CpxR,-,-186] [CpxR,-,-178] [CpxR,-,-166] [CpxR,-,-141] [CpxR,-,-129.5] [CpxR,-,-108.5] [CpxR,-,-100] [CpxR,-,-95.5] [CpxR,-,-73.5] [CpxR,-,-52] [CpxR,-,-48] [CpxR,-,-43] [CpxR,-,-21.5] [CpxR,-,3]   csgDp1
  [CpxR,-,-186] [CpxR,-,-178] [CpxR,-,-166] [CpxR,-,-141] [CpxR,-,-129.5] [CpxR,-,-108.5] [CpxR,-,-100] [CpxR,-,-95.5] [CpxR,-,-73.5] [CpxR,-,-52] [CpxR,-,-48] [CpxR,-,-43] [CpxR,-,-21.5] [CpxR,-,3]   csgDp3
      [CpxR,-,67] rpoEp1a
      [CpxR,-,151] psdp


[CpxR,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [CpxR,-,-81.0] ungp
  [CpxR,-,-54.5] efeUp
  [CpxR,-,-37.0] motRp
  [CpxR,-,-9.0] tsrp1
  [CpxR,-,11.0] [NsrR,-,67.0] bamEp
  [CpxR,-,-464.0,-255.0] [CsgD,+,-57.5,-27.5,-80.5,-38.0] [CpxR,-,8.0] [BtsR,-,62.0] csgBp2
  [CpxR,-,-255.0,-464.0] [CsgD,+,-38.0,-27.5,-57.5,-80.5] [CpxR,-,8.0] [BtsR,-,62.0] csgBp
  [OmpR,-,-370.5] [CRP,+,-121.5] [IHF,+,-108.0] [IHF,-,-176.0] [CpxR,-,-373.0,-429.5,-93.0] [OmpR,+,-50.5,-90.5,-70.5] [OmpR,-,-50.5,-70.5] [CRP,+,-92.5,-52.5] [IHF,-,-62.0] [CpxR,-,-68.5] [RstA,-,-92.0] ompFp2
  [OmpR,-,-370.5] [CRP,+,-121.5] [IHF,+,-108.0] [IHF,-,-176.0] [CpxR,-,-429.5,-373.0,-93.0] [OmpR,+,-90.5,-50.5,-70.5] [OmpR,-,-50.5,-70.5] [CRP,+,-52.5,-92.5] [IHF,-,-62.0] [CpxR,-,-68.5] [RstA,-,-92.0] ompFp
  [CsgD,+,-166.5,-118.5] [CRP,+,-170.5] [RcdA,+,-298.5] [IHF,+,-173.5] [MlrA,+,-129.5] [CpxR,-,-95.5,-108.5,-141.0,-100.0,-186.0,-178.0,-166.0,-129.5] [Cra,+,-196.5,-227.5,-563.5] [BtsR,-,-25.0] [CsgD,+,9.5,29.5] [BasR,+,-90.5] [OmpR,+,-49.5] [CRP,+,-42.5] [IHF,+,-66.5] [CpxR,-,-21.5,3.0,-73.5,-43.0,-52.0,-48.0] [RstA,-,-50.5] [MqsA,-,-83.5] [BtsR,-,37.0] [Cra,+,46.5] csgDp1
  [CsgD,+,-166.5,-118.5] [CRP,+,-170.5] [RcdA,+,-298.5] [IHF,+,-173.5] [MlrA,+,-129.5] [CpxR,-,-100.0,-129.5,-141.0,-166.0,-108.5,-95.5,-178.0,-186.0] [Cra,+,-227.5,-563.5,-196.5] [BtsR,-,-25.0] [CsgD,+,9.5,29.5] [BasR,+,-90.5] [OmpR,+,-49.5] [CRP,+,-42.5] [IHF,+,-66.5] [CpxR,-,3.0,-52.0,-43.0,-21.5,-48.0,-73.5] [RstA,-,-50.5] [MqsA,-,-83.5] [BtsR,-,37.0] [Cra,+,46.5] csgDp3
  [CpxR,-,67.0] rpoEp1a
  [CpxR,-,151.0] psdp

  

  

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