RegulonDB RegulonDB 11.1: Regulatory Phrase Regulatory Phrase


List of promoters regulated by [Cra,+] regulatory phrase


List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases


[Cra,+] Regulatory phrases      

[Cra,+] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [Cra,+,-76.5]   icdAp2
    [Cra,+,-48.5]   ptsHp2
    [Cra,+,-45.5]   crpp1
    [Cra,+,-45.5]   ppsAp
  [Cra,+,-198.5]     aroPp2
  [Cra,+,-177.5]     aroPp1
  [Cra,+,-166.5]     aceBp
  [Cra,+,-139.5]     pckp
  [Cra,+,-134.5] [Cra,+,-105.5]     cydAp5
  [Cra,+,-563.5] [Cra,+,-227.5] [Cra,+,-196.5]   [Cra,+,46.5] csgDp3
  [Cra,+,-563.5] [Cra,+,-227.5] [Cra,+,-196.5]   [Cra,+,46.5] csgDp1

[Cra,+] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.