RegulonDB RegulonDB 11.1: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [CsgD,+] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[CsgD,+] Regulatory phrases      

[CsgD,+] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [CsgD,+,-42.5]   yccTp
    [CsgD,+,-91.5] [CsgD,+,-76.5]   nlpAp
    [CsgD,+,-65.5] [CsgD,+,-47]   adrAp
    [CsgD,+,-80.5] [CsgD,+,-57.5] [CsgD,+,-38] [CsgD,+,-27.5]   csgBp
    [CsgD,+,-80.5] [CsgD,+,-57.5] [CsgD,+,-38] [CsgD,+,-27.5]   csgBp2
  [CsgD,+,-166.5] [CsgD,+,-118.5] [CsgD,+,9.5] [CsgD,+,29.5]   csgDp1
  [CsgD,+,-166.5] [CsgD,+,-118.5] [CsgD,+,9.5] [CsgD,+,29.5]   csgDp3
  [CsgD,+,-166.5] [CsgD,+,-136.5] [CsgD,+,-114.5]     wrbAp


[CsgD,+] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [CsgD,+,-42.5] yccTp
  [CsgD,+,-91.5,-76.5] nlpAp
  [CsgD,+,-47.0,-65.5] adrAp
  [CpxR,-,-255.0,-464.0] [CsgD,+,-38.0,-80.5,-27.5,-57.5] [CpxR,-,8.0] [BtsR,-,62.0] csgBp
  [CpxR,-,-464.0,-255.0] [CsgD,+,-27.5,-80.5,-57.5,-38.0] [CpxR,-,8.0] [BtsR,-,62.0] csgBp2
  [CsgD,+,-166.5,-118.5] [CRP,+,-170.5] [RcdA,+,-298.5] [IHF,+,-173.5] [MlrA,+,-129.5] [CpxR,-,-141.0,-108.5,-100.0,-95.5,-166.0,-186.0,-178.0,-129.5] [Cra,+,-563.5,-196.5,-227.5] [BtsR,-,-25.0] [CsgD,+,9.5,29.5] [BasR,+,-90.5] [OmpR,+,-49.5] [CRP,+,-42.5] [IHF,+,-66.5] [CpxR,-,3.0,-48.0,-52.0,-21.5,-43.0,-73.5] [RstA,-,-50.5] [MqsA,-,-83.5] [BtsR,-,37.0] [Cra,+,46.5] csgDp1
  [CsgD,+,-118.5,-166.5] [CRP,+,-170.5] [RcdA,+,-298.5] [IHF,+,-173.5] [MlrA,+,-129.5] [CpxR,-,-129.5,-166.0,-141.0,-95.5,-100.0,-108.5,-186.0,-178.0] [Cra,+,-563.5,-227.5,-196.5] [BtsR,-,-25.0] [CsgD,+,9.5,29.5] [BasR,+,-90.5] [OmpR,+,-49.5] [CRP,+,-42.5] [IHF,+,-66.5] [CpxR,-,3.0,-52.0,-43.0,-21.5,-73.5,-48.0] [RstA,-,-50.5] [MqsA,-,-83.5] [BtsR,-,37.0] [Cra,+,46.5] csgDp3
  [CsgD,+,-114.5,-136.5,-166.5] wrbAp

  

  

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