RegulonDB RegulonDB 11.1: Regulatory Phrase Regulatory Phrase


List of promoters regulated by [CsgD,-] regulatory phrase


List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases


[CsgD,-] Regulatory phrases      

[CsgD,-] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [CsgD,-,-10.5]   fliAp1
    [CsgD,-,2]   pepDp3
    [CsgD,-,-85.5] [CsgD,-,-70.5]   fliFp1
    [CsgD,-,-39.5] [CsgD,-,-24.5]   fliEp1
    [CsgD,-,-12.5] [CsgD,-,15.5]   ubiTp2
    [CsgD,-,1.5] [CsgD,-,17.5]   flgMp
    [CsgD,-,18.5] [CsgD,-,33.5] fliEp2

[CsgD,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.