RegulonDB RegulonDB 10.6.3: Regulatory Phrase Regulatory Phrase


List of promoters regulated by [DnaA,-] regulatory phrase


List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases


[DnaA,-] Regulatory phrases      

[DnaA,-] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [DnaA,-,-57]   dnaAp2
    [DnaA,-,-48]   rpoHp3
    [DnaA,-,-14]   nrdAp
    [DnaA,-,-7.5]   aldAp
    [DnaA,-,23]   dnaAp1
    [DnaA,-,-55] [DnaA,-,13]   yjeVp
    [DnaA,-,-55] [DnaA,-,-31]   rpoHp4
    [DnaA,-,-25] [DnaA,-,-4]   recNp
    [DnaA,-,-41] [DnaA,-,-27] [DnaA,-,-15]   uvrBp3
  [DnaA,-,-148] [DnaA,-,-128] [DnaA,-,-81] [DnaA,-,-16]   uvrBp2
      [DnaA,-,248] guaBp

[DnaA,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.