RegulonDB RegulonDB 11.1: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [FadR,-] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[FadR,-] Regulatory phrases      

[FadR,-] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [FadR,-,2]   fadMp1
    [FadR,-,4]   fadHp
    [FadR,-,8]   fadIp
    [FadR,-,9]   fadBp
    [FadR,-,-17] [FadR,-,9]   fadLp
  [FadR,-,-106] [FadR,-,-20]   fadDp
    [FadR,-,5] [FadR,-,97] uspAp1
      [FadR,-,74] fadEp


[FadR,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [FadR,-,2.0] fadMp1
  [HipB,-,-132.5] [FadR,-,4.0] [ArcA,-,19.0] [CRP,+,-61.5] fadHp
  [FadR,-,8.0] [ArcA,-,-17.0] fadIp
  [FadR,-,9.0] [ArcA,-,-29.0] [Fis,+,-27.0] fadBp
  [OmpR,-,-149.5] [CRP,+,-157.5] [PhoP,+,-191.5] [FadR,-,-17.0,9.0] [OmpR,-,-60.5] [ArcA,-,-38.0] [OmpR,-,119.5,69.5] fadLp
  [FadR,-,-106.0] [FadR,-,-20.0] [ArcA,-,-7.0] [CRP,+,-59.5] fadDp
  [FadR,-,5.0] [IHF,+,-81.0] [FadR,-,97.0] uspAp1
  [ArcA,-,15.0] [FadR,-,74.0] fadEp

  

  

RegulonDB