RegulonDB RegulonDB 10.8: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [Fur,-] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[Fur,-] Regulatory phrases      

[Fur,-] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [Fur,-,-88.5]   pyrCp
    [Fur,-,-77]   yhhYp
    [Fur,-,-61]   nrdHp
    [Fur,-,-49]   purRp
    [Fur,-,-46]   exbDp
    [Fur,-,-31.5]   mntHp
    [Fur,-,-18]   sufAp
    [Fur,-,-17]   feoAp
    [Fur,-,-5]   ygaCp
    [Fur,-,-3]   fhuAp
    [Fur,-,-1]   metJp2
    [Fur,-,6]   hmpp
    [Fur,-,-46] [Fur,-,-40]   exbBp
    [Fur,-,-27] [Fur,-,3]   yjjZp
    [Fur,-,-10] [Fur,-,15]   fhuEp
    [Fur,-,-7] [Fur,-,-1]   furpa
    [Fur,-,1] [Fur,-,7]   furpb
    [Fur,-,2] [Fur,-,4]   nohAp
    [Fur,-,3] [Fur,-,6]   gpmAp
    [Fur,-,-29] [Fur,-,-26] [Fur,-,-23]   fecAp
    [Fur,-,-22] [Fur,-,-16] [Fur,-,-4]   cirAp2
    [Fur,-,-19] [Fur,-,-15] [Fur,-,26]   tonBp
    [Fur,-,-19] [Fur,-,-15] [Fur,-,-9]   yqjHp
    [Fur,-,-18] [Fur,-,-15] [Fur,-,-12]   yhhXp5
    [Fur,-,-13] [Fur,-,-7] [Fur,-,-1]   fepBp
    [Fur,-,-85] [Fur,-,-79] [Fur,-,-62] [Fur,-,-56]   fhuFp
    [Fur,-,-50] [Fur,-,-44] [Fur,-,-38] [Fur,-,-32]   entSp1
    [Fur,-,-42] [Fur,-,-36] [Fur,-,-33] [Fur,-,-30]   sodAp
    [Fur,-,-35] [Fur,-,-29] [Fur,-,-23] [Fur,-,-17]   cirAp1
    [Fur,-,-14] [Fur,-,-10] [Fur,-,-7] [Fur,-,-4]   fecIp
    [Fur,-,-6] [Fur,-,2] [Fur,-,3] [Fur,-,12]   fiup
    [Fur,-,9] [Fur,-,15] [Fur,-,21] [Fur,-,27]   fepDp1
    [Fur,-,-28] [Fur,-,-21] [Fur,-,-15] [Fur,-,-9] [Fur,-,-2]   fesp
    [Fur,-,-18] [Fur,-,-11] [Fur,-,-5] [Fur,-,2] [Fur,-,9]   fepAp
  [Fur,-,-100] [Fur,-,13] [Fur,-,16] [Fur,-,19] [Fur,-,25] [Fur,-,31] [Fur,-,58] entCp
  [Fur,-,-213]     cyoAp
  [Fur,-,-136]     oppAp
  [Fur,-,-124]     metHp
      [Fur,-,90] garPp
      [Fur,-,115] flhDp
      [Fur,-,156] gspCp3
      [Fur,-,78] [Fur,-,81] [Fur,-,87] rcnAp


[Fur,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [PurR,-,-23.5] [Fur,-,-88.5] pyrCp
  [Fur,-,-77.0] yhhYp
  [Fur,-,-61.0] [NrdR,-,-14.5,-45.5] nrdHp
  [Fur,-,-49.0] [PurR,-,103.5,191.5] purRp
  [Fur,-,-46.0] exbDp
  [MntR,-,5.5] [OxyR,+,-76.0,-54.0] [Fur,-,-31.5] mntHp
  [IHF,+,-145.0] [OxyR,+,-232.0,-210.0] [IscR,+,-145.5,-104.5] [NsrR,-,-6.0,-68.0] [Fur,-,-18.0] [IscR,+,-42.5] sufAp
  [NagC,?,-128.0] [FNR,+,-90.5] [Fur,-,-17.0] feoAp
  [Fur,-,-5.0] ygaCp
  [Fur,-,-3.0] fhuAp
  [Fur,-,-1.0] metJp2
  [MetR,+,-80.0] [NsrR,-,20.0,2.0,-38.0] [Fur,-,6.0] [FNR,-,5.5] hmpp
  [Fur,-,-40.0,-46.0] exbBp
  [OxyR,+,-62.0] [Fur,-,3.0,-27.0] yjjZp
  [Fur,-,15.0,-10.0] fhuEp
  [CRP,+,-77.5] [Fur,-,-1.0,-7.0] furpa
  [CRP,+,-70.5] [Fur,-,7.0,1.0] furpb
  [Fur,-,2.0,4.0] nohAp
  [Fur,-,3.0,6.0] gpmAp
  [Fur,-,-29.0,-26.0,-23.0] [PdhR,+,-21.0] fecAp
  [Fur,-,-22.0,-4.0,-16.0] cirAp2
  [Fur,-,-15.0,-19.0,26.0] [Fur,+,-25.0] tonBp
  [Fur,-,-15.0,-19.0,-9.0] [NfeR,-,18.0] yqjHp
  [Fur,-,-15.0,-12.0,-18.0] yhhXp5
  [Fur,-,-7.0,-1.0,-13.0] [RutR,-,172.5] fepBp
  [OxyR,-,-105.0] [OxyR,-,2.0,-21.0,-83.0] [Fur,-,-85.0,-79.0,-56.0,-62.0] fhuFp
  [Fur,-,-44.0,-50.0,-38.0,-32.0] [Fur,+,-38.0,-32.0,-44.0,-50.0] entSp1
  [CRP,+,-99.5] [ArcA,-,-38.0,-10.0,-21.0] [SoxS,+,-44.0] [Rob,+,-40.5] [SoxR,+,9.0] [Fur,-,-30.0,-33.0,-42.0,-36.0] [IHF,-,-48.0,-68.0,-24.0,-1.0] [MarA,+,-40.5] [FNR,-,-37.5] sodAp
  [Fur,-,-23.0,-35.0,-29.0,-17.0] cirAp1
  [Fur,-,-7.0,-10.0,-4.0,-14.0] [SlyA,-,-62.5] fecIp
  [CRP,+,-158.5] [Fur,-,12.0,3.0,-6.0] fiup
  [Fur,-,27.0,15.0,21.0,9.0] fepDp1
  [FNR,+,-143.5] [Fur,-,-2.0,-21.0,-15.0,-28.0,-9.0] [H-NS,+,-0.5] fesp
  [CRP,+,-42.5] [Fur,-,-11.0,-18.0,-5.0,9.0,2.0] fepAp
  [CRP,+,-267.5] [Fur,-,-100.0] [CRP,+,-29.5] [Fur,-,19.0,13.0,25.0,16.0] [Fur,-,58.0,31.0] entCp
  [PdhR,-,-177.0] [ArcA,-,-200.0] [CRP,+,-191.5] [Fur,-,-213.0] [Cra,-,-268.5] [FNR,-,-192.5] [CRP,+,-37.5] [HprR,-,69.5] [CusR,+,69.5] cyoAp
  [Fur,-,-136.0] [Lrp,-,-1818.0] oppAp
  [Fur,-,-124.0] [MetR,+,-57.0] metHp
  [Fur,-,90.0] garPp
  [OmpR,-,-145.5] [LrhA,-,-112.0] [OmpR,-,18.5] [CRP,+,-71.5] [AcrR,-,-31.5] [IHF,-,-92.0] [FliZ,-,12.0] [YjjQ,-,11.0] [RcsAB,-,11.0] [Fur,-,115.0] flhDp
  [Fur,-,156.0] gspCp3
  [RcnR,-,26.5] [RcnR,-,46.5] [Fur,-,81.0,87.0,78.0] rcnAp

  

  

RegulonDB