RegulonDB RegulonDB 10.8: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [H-NS,-] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[H-NS,-] Regulatory phrases      

[H-NS,-] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [H-NS,-,-46]   casAp
    [H-NS,-,3.5]   dpsp
    [H-NS,-,-88.5] [H-NS,-,-65.5]   yciGp
    [H-NS,-,-56.5] [H-NS,-,-6]   hlyEp
    [H-NS,-,-83] [H-NS,-,-50] [H-NS,-,-26]   rrsBp1
    [H-NS,-,-47] [H-NS,-,-36] [H-NS,-,-18] [H-NS,-,-2]   galEp1
    [H-NS,-,-67] [H-NS,-,-54] [H-NS,-,-31] [H-NS,-,-5] [H-NS,-,6] [H-NS,-,24]   lacZp1
  [H-NS,-,-182] [H-NS,-,-113] [H-NS,-,-40]   hnsp
  [H-NS,-,-317] [H-NS,-,-260] [H-NS,-,-175] [H-NS,-,-129] [H-NS,-,-32]   cadBp
  [H-NS,-,-143.5] [H-NS,-,-105.5] [H-NS,-,-58] [H-NS,-,-9.5] [H-NS,-,23.5]   cspAp1
  [H-NS,-,-131.5] [H-NS,-,-101.5] [H-NS,-,-83] [H-NS,-,-56] [H-NS,-,-20.5] [H-NS,-,15.5]   ftnAp
    [H-NS,-,-10.5] [H-NS,-,240.5] [H-NS,-,288.5] mdtJp
    [H-NS,-,-33] [H-NS,-,7] [H-NS,-,26] [H-NS,-,45] [H-NS,-,72] [H-NS,-,84] [H-NS,-,100] [H-NS,-,130] [H-NS,-,156] [H-NS,-,170] proVp3
  [H-NS,-,-212]     leuOp2
  [H-NS,-,-118]     hdeAp
  [H-NS,-,-96]     leuOp
  [H-NS,-,-439] [H-NS,-,-415]     nrdAp
  [H-NS,-,-174.5] [H-NS,-,-161.5]     yjjPp
  [H-NS,-,-123.5] [H-NS,-,-110.5]     yjjQp
      [H-NS,-,680] bglGp


[H-NS,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [LeuO,+,-110.0] [LeuO,+,-80.0,21.0] [H-NS,-,-46.0] [CRP,-,-89.5] [SlyA,+,81.5] [LeuO,+,47.0] casAp
  [IHF,+,-98.5] [MntR,-,-17.5] [H-NS,-,3.5] [OxyR,+,-66.0,-17.0,-44.0] [Fis,-,-10.0,-26.0] dpsp
  [H-NS,-,-65.5,-88.5] [McbR,+,-88.5,-67.5] yciGp
  [Fis,-,-110.0,-192.0] [SlyA,+,-44.5,-55.5] [H-NS,-,-56.5,-6.0] [CRP,+,-61.5] [FNR,+,-61.5] [H-NS,+,-56.5,-6.0] [Fis,-,19.0,-63.0] [SlyA,+,61.5,90.5,52.5,76.5] hlyEp
  [Fis,+,-143.0,-102.0] [H-NS,-,-83.0,-50.0,-26.0] [Fis,+,-71.0] [Lrp,-,-53.0] [Lrp,-,269.0,75.0] rrsBp1
  [H-NS,-,-18.0,-2.0,-36.0,-47.0] [CRP,+,-41.5] [HU,-,6.5] [GalS,-,-60.5] [GalR,-,-60.5] [GalS,-,52.5] [GalR,-,46.5] galEp1
  [H-NS,-,-67.0,-31.0,6.0,24.0,-5.0,-54.0] [MarA,-,-30.0] [CRP,+,11.5,-61.5] [LacI,-,-82.0,11.0] [LacI,-,412.0] lacZp1
  [H-NS,-,-182.0,-113.0] [Fis,+,-282.0,-243.0,-174.0,-118.0] [H-NS,-,-40.0] [Fis,+,-10.0,25.0,-71.0] hnsp
  [ArcA,-,-179.0] [H-NS,-,-129.0,-175.0,-317.0,-260.0] [H-NS,-,-32.0] cadBp
  [H-NS,-,-105.5,-143.5] [Fis,+,-126.0] [H-NS,-,23.5,-9.5,-58.0] [Fis,+,-72.0,12.0] [Fis,+,87.0,119.0] cspAp1
  [H-NS,-,-101.5,-131.5] [H-NS,-,-83.0,-56.0,-20.5,15.5] [Fur,+,-77.0,-83.0,-89.0,-65.0,-71.0] ftnAp
  [H-NS,-,-10.5] [H-NS,-,288.5,240.5] mdtJp
  [IHF,+,-18.5] [H-NS,-,7.0,-33.0,26.0] [IHF,+,140.0] [H-NS,-,100.0,84.0,130.0,45.0,156.0,170.0,72.0] proVp3
  [LeuO,+,-195.0,-172.0,-280.0,-254.0] [H-NS,-,-212.0] [LeuO,-,-254.0,-195.0,-172.0,-280.0] [RcsB-BglJ,+,-58.5] leuOp2
  [GadX,-,-126.5] [H-NS,-,-118.0] [GadW,-,-126.5] [GadX,+,-126.5] [GadE,+,-117.5] [Lrp,-,-159.0,-116.0,-97.0] [GadW,+,-126.5] [GadX,-,-53.5,-74.5] [GadW,-,-53.5,-74.5] [MarA,-,-39.0] [PhoP,+,-32.0] [GadX,+,-53.5,-74.5] [GadE,+,9.5] [TorR,+,-27.5,-51.5] [Lrp,-,-64.0,-55.0,-18.0] [FliZ,-,8.0] [GadW,+,-53.5,-74.5] hdeAp
  [SlyA,+,-117.5,-125.5] [H-NS,-,-96.0] [LrhA,+,-143.0] [LeuO,+,-56.0] leuOp
  [H-NS,-,-415.0,-439.0] [CRP,+,-136.5] [Fis,+,-199.0,-323.0,-128.0,-269.0,-156.0] [ArgP,+,-190.5,-163.5,-334.5,-281.5,-218.5,-244.5] [DnaA,-,-14.0] [DnaA,+,-36.5,-48.0] [NrdR,-,-7.5,25.5] nrdAp
  [H-NS,-,-161.5,-174.5] yjjPp
  [H-NS,-,-110.5,-123.5] yjjQp
  [LeuO,+,-149.0,-118.0] [RcsB-BglJ,+,-95.5] [CRP,+,-61.5] [Fis,-,-52.0,-27.0] [H-NS,-,680.0] bglGp

  

  

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