RegulonDB RegulonDB 10.9: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [Lrp,-] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[Lrp,-] Regulatory phrases      

[Lrp,-] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [Lrp,-,-58]   lysUp1
    [Lrp,-,-52]   osmCp1
    [Lrp,-,-73] [Lrp,-,-53]   rrsAp1
    [Lrp,-,-73] [Lrp,-,-53]   rrsAp
  [Lrp,-,-157] [Lrp,-,-65] [Lrp,-,-6]   adhEp
  [Lrp,-,-157] [Lrp,-,-65] [Lrp,-,-6]   adhEp1
  [Lrp,-,-159] [Lrp,-,-116] [Lrp,-,-97] [Lrp,-,-64] [Lrp,-,-55] [Lrp,-,-18]   hdeAp
  [Lrp,-,-159] [Lrp,-,-116] [Lrp,-,-97] [Lrp,-,-64] [Lrp,-,-55] [Lrp,-,-18]   hdeAp2
  [Lrp,-,-192] [Lrp,-,-161] [Lrp,-,-80] [Lrp,-,-45] [Lrp,-,-16] [Lrp,-,5]   ilvIp2
    [Lrp,-,-53] [Lrp,-,75] [Lrp,-,269] rrsBp
    [Lrp,-,-53] [Lrp,-,75] [Lrp,-,269] rrsBp1
    [Lrp,-,27.5] [Lrp,-,58.5] [Lrp,-,87.5] [Lrp,-,122] micFp
    [Lrp,-,27.5] [Lrp,-,58.5] [Lrp,-,87.5] [Lrp,-,122] micFp2
    [Lrp,-,-56] [Lrp,-,8] [Lrp,-,32] [Lrp,-,49] lrpp
    [Lrp,-,-73.5] [Lrp,-,-40.5] [Lrp,-,-6.5] [Lrp,-,31.5] leuEp
  [Lrp,-,-342] [Lrp,-,-306.5] [Lrp,-,-277.5] [Lrp,-,-246.5] [Lrp,-,-174] [Lrp,-,5.5] [Lrp,-,36] [Lrp,-,98.5] [Lrp,-,120] ompCp2
  [Lrp,-,-319] [Lrp,-,-283.5] [Lrp,-,-254.5] [Lrp,-,-223.5] [Lrp,-,-151] [Lrp,-,28] [Lrp,-,59] [Lrp,-,121.5] [Lrp,-,143] ompCp3
  [Lrp,-,-376] [Lrp,-,-340.5] [Lrp,-,-311.5] [Lrp,-,-280.5] [Lrp,-,-29.5] [Lrp,-,2] [Lrp,-,64.5] [Lrp,-,86] ompCp1
  [Lrp,-,-279] [Lrp,-,-254] [Lrp,-,-206] [Lrp,-,-175] [Lrp,-,-149] [Lrp,-,-119] [Lrp,-,-81] [Lrp,-,-36] [Lrp,-,-4] [Lrp,-,44] [Lrp,-,66] dadAp3
  [Lrp,-,-266] [Lrp,-,-241] [Lrp,-,-193] [Lrp,-,-162] [Lrp,-,-136] [Lrp,-,-106] [Lrp,-,-68] [Lrp,-,-23] [Lrp,-,10] [Lrp,-,57] [Lrp,-,79] dadAp2
  [Lrp,-,-250] [Lrp,-,-225] [Lrp,-,-177] [Lrp,-,-146] [Lrp,-,-120] [Lrp,-,-90] [Lrp,-,-52] [Lrp,-,-7] [Lrp,-,26] [Lrp,-,73] [Lrp,-,95] dadAp1
  [Lrp,-,-1818]     oppAp
  [Lrp,-,-127]     livJp
  [Lrp,-,-186] [Lrp,-,-149]     osmYp2
  [Lrp,-,-186] [Lrp,-,-149]     osmYp
      [Lrp,-,167.5] [Lrp,-,200] [Lrp,-,232] ilvLp2


[Lrp,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [Lrp,-,-58.0] lysUp1
  [Lrp,-,-52.0] [NhaR,+,-42.0] [RcsB,+,-41.5] osmCp1
  [Fis,+,-133.0,-111.0] [Lrp,-,-53.0,-73.0] [Fis,+,-71.0,-91.0] rrsAp1
  [Fis,+,-111.0,-133.0] [Lrp,-,-73.0,-53.0] [Fis,+,-91.0,-71.0] rrsAp
  [Lrp,-,-157.0] [Fis,+,-148.0] [Lrp,-,-65.0,-6.0] [Fis,+,-42.0,-68.0] [NarL,-,81.0,90.0] [Cra,-,36.5] adhEp
  [Lrp,-,-157.0] [Fis,+,-148.0] [Lrp,-,-65.0,-6.0] [Fis,+,-68.0,-42.0] [NarL,-,90.0,81.0] [Cra,-,36.5] adhEp1
  [GadX,+,-126.5] [GadE,+,-117.5] [GadX,-,-126.5] [Lrp,-,-159.0,-97.0,-116.0] [H-NS,-,-118.0] [GadW,-,-126.5] [GadW,+,-126.5] [GadX,+,-74.5,-53.5] [GadE,+,9.5] [TorR,+,-27.5,-51.5] [GadX,-,-53.5,-74.5] [Lrp,-,-18.0,-55.0,-64.0] [FliZ,-,8.0] [GadW,-,-53.5,-74.5] [GadW,+,-74.5,-53.5] [MarA,-,-39.0] [PhoP,+,-32.0] hdeAp
  [GadX,+,-126.5] [GadE,+,-117.5] [GadX,-,-126.5] [Lrp,-,-97.0,-116.0,-159.0] [H-NS,-,-118.0] [GadW,-,-126.5] [GadW,+,-126.5] [GadX,+,-53.5,-74.5] [GadE,+,9.5] [TorR,+,-27.5,-51.5] [GadX,-,-53.5,-74.5] [Lrp,-,-18.0,-55.0,-64.0] [FliZ,-,8.0] [GadW,-,-74.5,-53.5] [GadW,+,-74.5,-53.5] [MarA,-,-39.0] [PhoP,+,-32.0] hdeAp2
  [Lrp,-,-161.0,-192.0] [Lrp,-,-16.0,5.0,-80.0,-45.0] ilvIp2
  [Fis,+,-102.0,-143.0] [Lrp,-,-53.0] [H-NS,-,-83.0,-26.0,-50.0] [Fis,+,-71.0] [Lrp,-,269.0,75.0] rrsBp
  [Fis,+,-102.0,-143.0] [Lrp,-,-53.0] [H-NS,-,-83.0,-26.0,-50.0] [Fis,+,-71.0] [Lrp,-,75.0,269.0] rrsBp1
  [OmpR,+,-206.5,-186.5,-165.5] [SoxS,+,-119.5] [Lrp,-,27.5] [IHF,-,-72.0] [MarA,+,-40.0] [SoxS,+,-38.5] [Rob,+,-40.0] [AcrR,-,41.0] [Lrp,-,58.5,87.5,122.0] micFp
  [OmpR,+,-206.5,-186.5,-165.5] [SoxS,+,-119.5] [Lrp,-,27.5] [IHF,-,-72.0] [MarA,+,-40.0] [SoxS,+,-38.5] [Rob,+,-40.0] [AcrR,-,41.0] [Lrp,-,122.0,87.5,58.5] micFp2
  [Lrp,-,-56.0,8.0] [NsrR,-,52.0] [Lrp,-,32.0,49.0] lrpp
  [Lrp,-,-73.5,-6.5,-40.5] [Lrp,-,31.5] leuEp
  [Lrp,-,-246.5,-174.0,-306.5,-277.5,-342.0] [Lrp,-,5.5] [Lrp,-,36.0,98.5,120.0] ompCp2
  [Lrp,-,-223.5,-151.0,-254.5,-283.5,-319.0] [IHF,-,-125.0] [Lrp,-,28.0] [Lrp,-,121.5,143.0,59.0] ompCp3
  [Lrp,-,-311.5,-340.5,-376.0,-280.5] [IHF,-,-182.0] [CpxR,+,-95.0,-351.0,-134.0] [OmpR,+,-47.5,-88.5,-67.5] [Lrp,-,2.0,-29.5] [YjjQ,-,-64.0] [Lrp,-,86.0,64.5] ompCp1
  [Lrp,-,-206.0,-254.0,-279.0,-149.0,-119.0,-175.0] [Lrp,-,-36.0,-4.0,-81.0] [CRP,+,-9.5,-72.5] [Lrp,-,66.0,44.0] dadAp3
  [Lrp,-,-106.0,-136.0,-162.0,-241.0,-266.0,-193.0] [Lrp,-,10.0,-23.0,-68.0] [CRP,+,-59.5,7.0] [Lrp,-,57.0,79.0] dadAp2
  [Lrp,-,-177.0,-146.0,-250.0,-120.0,-225.0] [Lrp,-,-52.0,26.0,-7.0,-90.0] [CRP,-,20.5] [CRP,+,20.5,-43.5] [Lrp,-,73.0,95.0] dadAp1
  [Lrp,-,-1818.0] [Fur,-,-136.0] oppAp
  [Lrp,-,-127.0] livJp
  [Lrp,-,-186.0,-149.0] [IHF,-,-96.5] [IHF,-,-5.0] [Fis,-,-10.0] [CRP,-,12.5,1.5,-12.5] [Fis,-,72.0] osmYp2
  [Lrp,-,-186.0,-149.0] [IHF,-,-96.5] [IHF,-,-5.0] [Fis,-,-10.0] [CRP,-,1.5,-12.5] [Fis,-,72.0] osmYp
  [IHF,+,-89.0] [Lrp,-,232.0,200.0,167.5] [IHF,+,138.0] ilvLp2

  

  

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