RegulonDB RegulonDB 10.10: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [NarL,-] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[NarL,-] Regulatory phrases      

[NarL,-] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [NarL,-,-18.5]   ompWp
    [NarL,-,20]   dpiBp1
    [NarL,-,25]   dpiBp2
    [NarL,-,-78] [NarL,-,-69]   norVp
    [NarL,-,-50] [NarL,-,-22]   nrfAp
    [NarL,-,-49] [NarL,-,-40]   napFp1
    [NarL,-,-46] [NarL,-,-37]   napFp2
    [NarL,-,-40] [NarL,-,-31]   dcuSp
    [NarL,-,-24] [NarL,-,-15]   adhEp2
    [NarL,-,-23] [NarL,-,-14]   ynfEp2
    [NarL,-,-23] [NarL,-,-14]   ynfEp
    [NarL,-,-10] [NarL,-,7]   hyaAp2
    [NarL,-,-10] [NarL,-,7]   hyaAp
    [NarL,-,-76] [NarL,-,-51] [NarL,-,21]   hybOp1
    [NarL,-,-27] [NarL,-,-7] [NarL,-,15]   dmsAp1
    [NarL,-,-42] [NarL,-,-16] [NarL,-,6] [NarL,-,15]   ydhYp
    [NarL,-,-26] [NarL,-,-12] [NarL,-,-4] [NarL,-,6] [NarL,-,14]   frdAp
    [NarL,-,-26] [NarL,-,-12] [NarL,-,-4] [NarL,-,6] [NarL,-,14]   frdAp2
  [NarL,-,-112] [NarL,-,-76] [NarL,-,-67]   aspAp
  [NarL,-,-348] [NarL,-,-346] [NarL,-,-286] [NarL,-,-270] [NarL,-,-253] [NarL,-,-235] [NarL,-,-226] [NarL,-,-152] [NarL,-,-101] [NarL,-,-37] [NarL,-,-20]   focAp1
    [NarL,-,-27] [NarL,-,-25] [NarL,-,36] [NarL,-,52] [NarL,-,69] [NarL,-,87] [NarL,-,96] [NarL,-,170] [NarL,-,221] [NarL,-,285] [NarL,-,302] focAp3
  [NarL,-,-109] [NarL,-,-45] [NarL,-,2] [NarL,-,19] [NarL,-,24] [NarL,-,43] dcuBp1
      [NarL,-,37] citCp2
      [NarL,-,81] [NarL,-,90] adhEp1
      [NarL,-,81] [NarL,-,90] adhEp


[NarL,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [FNR,-,-126.5] [ArcA,-,1.5] [NarL,-,-18.5] [CRP,-,-42.5] [FNR,+,-81.5] ompWp
  [ArcA,+,-95.5] [NarL,-,20.0] [CRP,-,45.5] [DpiA,+,77.0,104.0,146.0] [FNR,-,45.5] dpiBp1
  [DcuR,+,-98.0] [NarL,-,25.0] [DcuR,+,-37.0] dpiBp2
  [NorR,+,-132.0,-111.0] [FNR,-,-140.5] [IHF,+,-48.0] [IHF,-,17.0] [NarP,-,-69.0,-78.0] [NarL,-,-69.0,-78.0] [NorR,+,-87.0] norVp
  [NsrR,-,-121.0] [IHF,+,-127.0] [NsrR,-,-63.0] [IHF,-,-55.0] [NarP,+,-79.0,-70.0] [NarL,-,-22.0,-50.0] [NarL,+,-50.0,-70.0,-79.0] [Fis,-,-15.0] [FNR,+,-41.5] nrfAp
  [ModE,+,-133.5] [NarP,+,-40.0,-49.0] [NarL,-,-49.0,-40.0] [FNR,+,-64.5] napFp1
  [ModE,+,-130.5] [NarP,-,-37.0,-46.0] [NarL,-,-46.0,-37.0] napFp2
  [NarL,-,-40.0,-31.0] dcuSp
  [NarL,-,-24.0,-15.0] [FNR,+,-42.5] adhEp2
  [NarL,-,-14.0,-23.0] [FNR,+,-40.5] ynfEp2
  [NarL,-,-14.0,-23.0] [FNR,+,-40.5] ynfEp
  [IscR,-,-42.0,-39.0] [YdeO,+,-61.0] [ArcA,+,-67.0,-7.5] [NarP,-,7.0,-10.0] [NarL,-,7.0,-10.0] [Fis,-,-21.0] hyaAp2
  [IscR,-,-42.0,-39.0] [YdeO,+,-61.0] [ArcA,+,-67.0,-7.5] [NarP,-,7.0,-10.0] [NarL,-,7.0,-10.0] [Fis,-,-21.0] hyaAp
  [ArcA,-,-57.0] [NarL,-,21.0,-76.0,-51.0] hybOp1
  [NarL,-,-27.0,-7.0,15.0] [Fis,-,-33.0,8.0] [FNR,+,-41.5] [Fis,-,59.0] dmsAp1
  [NarP,-,6.0,15.0] [NarL,-,-16.0,-42.0,15.0] [FNR,+,-42.5] ydhYp
  [DcuR,+,-104.0] [NarL,-,-26.0,-12.0,14.0,-4.0] [FNR,+,-45.5] frdAp
  [DcuR,+,-104.0] [NarL,-,-12.0,14.0,-26.0,-4.0] [FNR,+,-45.5] frdAp2
  [NarL,-,-112.0] [DcuR,+,-161.0] [NarL,-,-76.0,-67.0] [DcuR,+,-75.0] [CRP,+,-90.5] [FNR,+,-40.5] aspAp
  [ArcA,+,-251.0,-114.0] [IHF,+,-112.5] [NarL,-,-235.0,-348.0,-346.0,-286.0,-270.0,-226.0,-152.0,-101.0,-253.0] [ArcA,+,-6.0] [NarL,-,-20.0,-37.0] [CRP,+,-40.5] [FNR,+,-40.5] focAp1
  [NarL,-,-27.0,-25.0] [FNR,+,-58.5] [NarL,-,302.0,285.0,221.0,170.0,96.0,87.0,69.0,52.0,36.0] focAp3
  [NarL,-,-109.0] [CRP,+,-106.5] [NarL,-,24.0,19.0,2.0,-45.0] [FNR,+,-45.5] [NarL,-,43.0] dcuBp1
  [CRP,-,11.5] [DpiA,+,-21.0,-48.0,-90.0] [FNR,-,11.5] [NarL,-,37.0] citCp2
  [Lrp,-,-157.0] [Fis,+,-148.0] [Lrp,-,-65.0,-6.0] [Fis,+,-68.0,-42.0] [NarL,-,90.0,81.0] [Cra,-,36.5] adhEp1
  [Lrp,-,-157.0] [Fis,+,-148.0] [Lrp,-,-65.0,-6.0] [Fis,+,-42.0,-68.0] [NarL,-,81.0,90.0] [Cra,-,36.5] adhEp

  

  

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