RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [OxyR,-] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[OxyR,-] Regulatory phrases      

[OxyR,-] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [OxyR,-,-31]   elaBp
    [OxyR,-,-72] [OxyR,-,-50]   ybjCp
    [OxyR,-,-54] [OxyR,-,-32]   uxuAp
    [OxyR,-,-18] [OxyR,-,5]   oxyRp2
    [OxyR,-,-18] [OxyR,-,5]   oxyRp
    [OxyR,-,-26] [OxyR,-,2] [OxyR,-,24]   flup
  [OxyR,-,-105] [OxyR,-,-83] [OxyR,-,-21] [OxyR,-,2]   fhuFp1
    [OxyR,-,9.5] [OxyR,-,31.5] ychFp
  [OxyR,-,-152] [OxyR,-,-130]     gntPp


[OxyR,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [OxyR,-,-31.0] [OxyR,+,-31.0] elaBp
  [OxyR,-,-50.0,-72.0] [MarA,+,-40.5] [SoxS,+,-56.5,-40.5] [Rob,+,-40.5] ybjCp
  [ExuR,-,-159.5] [UxuR,-,-159.5] [CRP,+,-142.5] [OxyR,-,-32.0,-54.0] [ExuR,-,-53.5] [UxuR,-,-53.5] [CRP,+,-57.5] uxuAp
  [OxyR,-,5.0,-18.0] oxyRp2
  [OxyR,-,-18.0,5.0] oxyRp
  [OxyR,-,24.0,2.0,-26.0] flup
  [OxyR,-,-105.0] [OxyR,-,-83.0,-21.0,2.0] [Fur,-,-56.0,-85.0,-62.0,-79.0] fhuFp1
  [OxyR,-,9.5] [OxyR,-,31.5] ychFp
  [OxyR,-,-130.0,-152.0] [UxuR,-,-130.5] [CRP,+,-126.5] [UxuR,-,-24.5] [CRP,+,-20.5,-41.5] gntPp

  

  

RegulonDB