RegulonDB RegulonDB 11.1: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [PdhR,-] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[PdhR,-] Regulatory phrases      

[PdhR,-] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [PdhR,-,-56]   glcDp
    [PdhR,-,-42]   mraZp
    [PdhR,-,-35]   ndhp
    [PdhR,-,17]   grcAp1
    [PdhR,-,19]   pdhRp2
    [PdhR,-,19]   pdhRp
  [PdhR,-,-178]     tomBp
  [PdhR,-,-177]     cyoAp
  [PdhR,-,-165]     hemLp


[PdhR,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [ArcA,-,-111.0,-104.0] [IHF,+,-107.0] [GlcC,+,-176.0] [PdhR,-,-56.0] glcDp
  [PdhR,-,-42.0] [MraZ,-,-3.0,8.0,18.0] mraZp
  [Fis,+,-123.0] [FNR,-,-94.5] [PdhR,-,-35.0] [NsrR,-,6.0] [ArcA,-,-57.0] [Fis,+,-72.0] [IHF,-,-58.0,-17.0,26.0] [FNR,-,-50.5] [Fis,-,51.0] [ArcA,-,36.0,68.0,52.0,66.0,57.0] ndhp
  [ArcA,+,-99.0] [Fis,+,-117.0,-159.0] [FNR,-,-93.5] [PdhR,-,17.0] [CRP,+,-40.5] [ArcA,+,-82.0] [Fis,+,-10.0] [FNR,+,-40.5] [FNR,-,-40.5] grcAp1
  [BtsR,-,-188.0,-203.0] [CRP,+,-110.5,-377.5] [Cra,-,-185.5] [PdhR,-,19.0] [CRP,+,-70.5,-82.5,-62.5,-50.5] [FNR,+,-50.5] [FNR,-,-50.5] pdhRp2
  [BtsR,-,-188.0,-203.0] [CRP,+,-110.5,-377.5] [Cra,-,-185.5] [PdhR,-,19.0] [CRP,+,-50.5,-82.5,-62.5,-70.5] [FNR,+,-50.5] [FNR,-,-50.5] pdhRp
  [PdhR,-,-178.0] [BasR,+,-394.5] [CpxR,+,-50.0] tomBp
  [PdhR,-,-177.0] [ArcA,-,-200.0] [CRP,+,-191.5] [FNR,-,-192.5] [Cra,-,-268.5] [Fur,-,-213.0] [CRP,+,-37.5] [HprR,-,69.5] [CusR,+,69.5] cyoAp
  [PdhR,-,-165.0] [PhoP,+,-31.0] hemLp

  

  

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