RegulonDB RegulonDB 11.1: Regulatory Phrase Regulatory Phrase


List of promoters regulated by [PhoB,+] regulatory phrase


List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases


[PhoB,+] Regulatory phrases      

[PhoB,+] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [PhoB,+,-57]   cusRp
    [PhoB,+,-54]   cusCp
    [PhoB,+,-33]   amnp1
    [PhoB,+,-31]   phoHp1
    [PhoB,+,-31]   phoAp
    [PhoB,+,-31]   phoBp
    [PhoB,+,-30]   asrp2
    [PhoB,+,-30]   asrp
    [PhoB,+,-27]   argPp
    [PhoB,+,-20]   ydfHp
    [PhoB,+,-58] [PhoB,+,-36]   ytfKp1
    [PhoB,+,-54] [PhoB,+,-32]   pstSp2
    [PhoB,+,-54] [PhoB,+,-32]   pstSp
    [PhoB,+,-53] [PhoB,+,-31]   psiEp
    [PhoB,+,-52] [PhoB,+,-30]   ugpBp1
  [PhoB,+,-113] [PhoB,+,-59.5]   yibDp1
  [PhoB,+,-113] [PhoB,+,-88] [PhoB,+,-32]   phoEp
  [PhoB,+,-146.5]     mipAp

[PhoB,+] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.