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List of promoters with sites of this regulated phrase.
Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.
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Promoters and their regulatory phrases |
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| [SoxR,+] phrase |
| Remote upstream site(s) | Proximal site(s) | Remote downstream site(s) | Promoter name | |
|---|---|---|---|---|
| [SoxR,+,-4] | yjcBp | |||
| [SoxR,+,8.5] | aroFp | |||
| [SoxR,+,9] | sodAp | |||
| [SoxR,+,-25.5] [SoxR,+,6] | soxSp | |||
| [SoxR,+,36] | yrbLp |
| [SoxR,+] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases. |
| Remote upstream site(s) | Proximal site(s) | Remote downstream site(s) | Promoter name | |
|---|---|---|---|---|
| [SoxR,+,-4.0] | yjcBp | |||
| [TyrR,-,-104.5] | [TyrR,-,-52.5,-29.5] [SoxR,+,8.5] | aroFp | ||
| [CRP,+,-99.5] | [ArcA,-,-38.0,-21.0,-10.0] [IHF,-,-68.0,-48.0,-24.0,-1.0] [MarA,+,-40.5] [FNR,-,-37.5] [SoxR,+,9.0] [SoxS,+,-44.0] [Rob,+,-40.5] [Fur,-,-42.0,-36.0,-30.0,-33.0] | sodAp | ||
| [AcrR,-,-25.5] [SoxS,-,3.0] [SoxR,+,-25.5,6.0] | soxSp | |||
| [BasR,-,-52.5] [SoxS,+,-26.0] [PhoP,+,-28.0] | [SoxR,+,36.0] | yrbLp |
