RegulonDB RegulonDB 10.8: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by ArcA,- regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


ArcA,- Regulatory phrases      

ArcA,- phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      hybOp1
      gltAp1
      fadLp
      acnAp2
      fadBp
      arcZp
      tpxp
      fadIp
      fadDp
      ompWp
      fadEp
      ydeAp
      fadHp
      mdhp1
      betIp
      rpoSp
      lpdAp
      lldPp
      icdAp1
      betTp
      ptsGp1
      sodAp
    uvrAp
    acnBp
    ssbp1
    ssbp2
    aldAp
    ndhp
    sdhCp
    ssbp3
      cyoAp
      cadBp
      puuAp
      nuoAp2
      glcDp
      rhaTp
      citCp1
      puuDp


ArcA,- phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [NarL,-,-51.0,21.0,-76.0] hybOp1
  [CRP,+,-107.5] [IHF,+,-70.0] gltAp1
  [OmpR,-,-149.5] [CRP,+,-157.5] [PhoP,+,-191.5] [OmpR,-,-60.5] [FadR,-,-17.0,9.0] [OmpR,-,119.5,69.5] fadLp
  [SoxS,+,-51.5] [Rob,+,-51.5] [CRP,+,-40.5] [MarA,+,-51.5] [FNR,-,-40.5] acnAp2
  [Fis,+,-27.0] [FadR,-,9.0] fadBp
  arcZp
  [FNR,-,-18.5] tpxp
  [FadR,-,8.0] fadIp
  [FadR,-,-106.0] [CRP,+,-59.5] [FadR,-,-20.0] fadDp
  [FNR,-,-126.5] [FNR,+,-81.5] [NarL,-,-18.5] [CRP,-,-42.5] ompWp
  [FadR,-,74.0] fadEp
  ydeAp
  [HipB,-,-132.5] [CRP,+,-61.5] [FadR,-,4.0] fadHp
  [BtsR,-,-145.0] [BtsR,-,-73.0,-49.0] [CRP,+,-60.5] mdhp1
  [BetI,-,-30.0] betIp
  [MqsA,-,-147.0] [CRP,-,-62.5] [CRP,-,56.5] rpoSp
  [Fis,+,-29.0] [CRP,-,-18.5] lpdAp
  [LldR,-,-97.0] [LldR,+,-97.0] [LldR,-,30.0] lldPp
  icdAp1
  [BetI,-,-30.0] betTp
  [CRP,+,-94.5] [Fis,-,-119.0,-145.0] [SoxS,+,-83.5] [CRP,+,-40.5] [Fis,+,-19.0,3.0] [Mlc,-,-6.0] [Fis,-,-80.0,3.0,-19.0] ptsGp1
  [CRP,+,-99.5] [SoxS,+,-44.0] [Rob,+,-40.5] [SoxR,+,9.0] [Fur,-,-30.0,-33.0,-42.0,-36.0] [IHF,-,-48.0,-68.0,-24.0,-1.0] [MarA,+,-40.5] [FNR,-,-37.5] sodAp
  [LexA,-,-28.5] uvrAp
  [Fis,-,-171.5] [CRP,+,-37.5] [Fis,-,-73.5,-29.5] acnBp
  ssbp1
  ssbp2
  [SoxS,+,-161.0] [Rob,+,-161.0] [MarA,+,-161.0] [DnaA,-,-7.5] [CRP,+,-59.5] [FNR,-,-10.5] aldAp
  [Fis,+,-123.0] [FNR,-,-94.5] [PdhR,-,-35.0] [NsrR,-,6.0] [Fis,+,-72.0] [IHF,-,-58.0,26.0,-17.0] [FNR,-,-50.5] [Fis,-,51.0] ndhp
  [ArcA,+,-211.0,-137.0] [CRP,+,-83.5] [Fur,+,-34.0] sdhCp
  [LexA,-,-46.5] ssbp3
  [PdhR,-,-177.0] [CRP,+,-191.5] [Fur,-,-213.0] [Cra,-,-268.5] [FNR,-,-192.5] [CRP,+,-37.5] [HprR,-,69.5] [CusR,+,69.5] cyoAp
  [H-NS,-,-129.0,-175.0,-317.0,-260.0] [H-NS,-,-32.0] cadBp
  [PuuR,-,-126.5,-161.5] [PuuR,-,-84.5,11.5] [FNR,-,29.0] puuAp
  [NarL,+,-122.0] [IHF,-,-83.0,-74.0,-66.0] [FNR,-,-40.5] nuoAp2
  [IHF,+,-107.0] [GlcC,+,-176.0] [PdhR,-,-56.0] glcDp
  [CRP,+,-93.5] [RhaS,?,-499.0] [RhaS,+,-74.0,-41.0] rhaTp
  [DpiA,+,-108.0,-135.0,-177.0] citCp1
  [PuuR,-,-94.5] [PuuR,-,1.5] [PuuR,-,43.5,78.5] [CRP,-,63.5] puuDp

  

  

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