RegulonDB RegulonDB 10.8: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by CRP,+ regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


CRP,+ Regulatory phrases      

CRP,+ phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      ansBp2
      aspAp
      pckp
      araJp
      uidAp
      cstAp1
      sdhCp
      chbBp
      hupBp3
      xylAp
      dctAp
      xylEp
      serAp2
      murQp2
      furpa
      ompRp2
      murQp1
      flhDp
      feaBp1
      ascFp
      gntTp1
      glnAp1
      chiPp
      furpb
      mlcp2
      epdp
      malTp
      prpRp
      gntKp
      csiDp
      hptp
      sfsAp
      cytRp
      ivbLp
      manAp
      ptsHp4
      glpDp
      ldtBp
      hupAp
      aaeXp
      modAp
      rbsDp
      hlyEp
      bglGp
      cspEp2
      fadHp
      secBp
      nanCp
      nanAp
      relAp2
      ulaAp
      aldBp
      kbaZp
      ppiAp3
      mdhp1
      ptsHp5
      crpp1
      fadDp
      tnaCp
      aldAp
      glpEp
      paaAp
      hicAp1
      preTp
      dcuRp
      araCp
      fumCp
      trgp1
      mcaSp
      marRp
      aerp
      nadCp
      yeiPp
      cpdBp
      tdcAp
      malIp
      ppiAp2
      galPp
      csiEp
      yeiWp
      fepAp
      cyaRp
      galSp
      yhfAp
      ptsHp1
      araFp
      caiFp
      mglBp
      bglGp2
      sbmCp2
      ychHp
      galEp1
      gapAp3
      ykgRp
      gntXp
      caiTp
      mhpRp1
      acnAp2
      glgSp1
      gatYp
      grcAp1
      focAp1
      ompAp1
      mplp1
      acnBp
      csqRp
      ugpBp2
      rpoEp2b
      raiAp
      glcCp
      yjhIp
      sdhDp2
      ppdDp
      manXp
      cddp
      idnDp
      nupCp
      pkap
      fucPp
      hofMp
      tsxp2
      nmpCp
      dadAp3
      nagEp
      lacZp1
      glpFp
      dadAp2
      ycdZp4
      dadAp1
      glpABCp
    srlAp
    entCp
    melAp
    cyoAp
    csgDp1
    exuTp2
    melRp
    lsrAp
    uxuAp
    lsrRp
    fixAp
    acsp2
    rhaBp
    idnKp
    dsdXp
    cspDp
    rhaSp
    nagBp
    malXp
    ptsGp1
    deoCp2
    udpP
    dusBp
    malEp
    mtlAp
    glpTQp
    gntPp
    ompFp
    rpoHp5
    pdhRp
    nupGp
  fumAp
      grpEp
      agpp
      malSp
      zraSp
      xylFp
      argGp
      hyfAp
      fiup
      fadLp
      nrdAp
      paaZp
      yjiYp
      proPp2
      ompRp3
      guaBp
      dgoRp
      gntTp3
      rmfp
      gntTp2
      feaRp2
      gltAp1
      prpBp
      dcuBp
      uxaCp
      yiaKp
      uhpTp
      sodAp
      ybiTp
      mhpAp
      rpsFp
      uxaBp
      araEp
      rhaTp
      araBp
      gcvTp
      malKp
      lgoRp4


CRP,+ phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [FNR,+,-41.5] ansBp2
  [DcuR,+,-161.0] [NarL,-,-112.0] [DcuR,+,-75.0] [FNR,+,-40.5] [NarL,-,-76.0,-67.0] aspAp
  [Cra,+,-139.5] [CRP,-,13.5] [DcuR,+,-13.0,-64.0] pckp
  [AraC,+,-64.0,-43.0] [CRP,-,44.5] araJp
  [UidR,-,-153.5] [UxuR,-,28.5] uidAp
  cstAp1
  [ArcA,+,-211.0,-137.0] [ArcA,-,-27.0,-32.0] [Fur,+,-34.0] [ArcA,-,257.0] sdhCp
  [NagC,-,-112.0] [ChbR,+,-61.0,-38.0] [NagC,-,1.0] [ChbR,-,-38.0,-61.0] chbBp
  [Fis,-,-145.0,-122.0] [Fis,-,-89.5] [Fis,-,141.0] hupBp3
  [AraC,-,-48.0,-25.0] [XylR,+,-62.5,-41.5] xylAp
  [DcuR,+,-106.0] dctAp
  [XylR,+,-44.0,-65.0] xylEp
  serAp2
  [MurR,-,-52.0,-20.0] murQp2
  [Fur,-,-1.0,-7.0] furpa
  ompRp2
  [MurR,-,-12.0,-44.0] murQp1
  [LrhA,-,-112.0] [OmpR,-,-145.5] [FliZ,-,12.0] [OmpR,-,18.5] [AcrR,-,-31.5] [IHF,-,-92.0] [YjjQ,-,11.0] [RcsAB,-,11.0] [Fur,-,115.0] flhDp
  [NsrR,-,-184.0] [FeaR,+,-64.0,-43.0] feaBp1
  [AscG,-,4.5,-72.5] ascFp
  [GntR,-,-14.5] [GntR,-,127.5] gntTp1
  [NtrC,-,27.0,8.0,-25.0] [NtrC,-,71.0,48.0] glnAp1
  [NagC,-,-244.0] [NagC,-,-22.0] chiPp
  [Fur,-,7.0,1.0] furpb
  [Mlc,-,4.0] mlcp2
  [Cra,-,3.5] epdp
  [Mlc,-,12.0] malTp
  [PhoB,-,-24.0] [AscG,-,-58.5,-46.5,-29.5,-36.5,-18.5] [PrpR,-,-61.5,-27.5] prpRp
  [IdnR,-,15.5,2.5] [GntR,-,2.5,15.5] gntKp
  [GlaR,-,-13.0,-32.0] csiDp
  [IHF,-,-24.0] hptp
  sfsAp
  [CytR,-,-59.0,-43.0,-22.0] [CRP,-,-64.5] cytRp
  ivbLp
  [CRP,-,-1.5,7.5] manAp
  [Mlc,-,13.0] [NagC,-,13.0] ptsHp4
  [GlpR,-,-0.5,19.5] [GlpR,-,455.5,414.5] glpDp
  [CRP,-,-63.5] ldtBp
  [Fis,+,-219.5,-167.5,-255.0,-93.5] hupAp
  aaeXp
  [ModE,-,-4.5] modAp
  [RbsR,-,8.5] rbsDp
  [Fis,-,-110.0,-192.0] [H-NS,+,-56.5,-6.0] [Fis,-,19.0,-63.0] [SlyA,+,-44.5,-55.5] [H-NS,-,-56.5,-6.0] [FNR,+,-61.5] [SlyA,+,61.5,90.5,52.5,76.5] hlyEp
  [LeuO,+,-149.0,-118.0] [RcsB-BglJ,+,-95.5] [Fis,-,-52.0,-27.0] [H-NS,-,680.0] bglGp
  cspEp2
  [HipB,-,-132.5] [ArcA,-,19.0] [FadR,-,4.0] fadHp
  secBp
  [NagC,-,-277.0] [NagC,-,-65.0] [NanR,-,-2.5,-11.5,6.5] nanCp
  [Fis,-,-52.0,-23.0,19.0] [NanR,-,6.5,-2.5,-11.5] nanAp
  relAp2
  [UlaR,-,-44.5,-19.5] ulaAp
  [Fis,-,-135.0,-113.0,-158.0] [Fis,-,-29.0,-48.0] aldBp
  [AgaR,-,-31.5,-75.5,3.5] kbaZp
  [CytR,-,-29.5,-48.0] [CRP,-,-7.5,-60.5] ppiAp3
  [BtsR,-,-145.0] [ArcA,-,27.0] [BtsR,-,-73.0,-49.0] mdhp1
  [NagC,-,16.0] ptsHp5
  [Fis,-,-92.0] [Cra,+,-45.5] [Fis,-,31.0,69.0,49.0] [CRP,-,41.5] crpp1
  [FadR,-,-106.0] [ArcA,-,-7.0] [FadR,-,-20.0] fadDp
  [TorR,+,-102.5] [TorR,+,-55.5] tnaCp
  [ArcA,-,-157.0,-137.0] [Rob,+,-161.0] [MarA,+,-161.0] [SoxS,+,-161.0] [ArcA,-,2.0,-5.0,13.0] [DnaA,-,-7.5] [FNR,-,-10.5] aldAp
  glpEp
  [IHF,+,-115.0] [SlyA,+,-177.5] [PaaX,-,30.0] [SlyA,+,-19.5,-74.5] paaAp
  hicAp1
  preTp
  dcuRp
  [AraC,+,-105.0] [AraC,-,-31.0,-84.0,-10.0] [XylR,-,2.5,-19.5] [AraC,+,-84.0] [AraC,-,128.0] araCp
  [CRP,?,-484.5] [MarA,+,-46.5] [SoxS,+,19.5] fumCp
  [Fis,+,-149.0] [Fis,+,-60.0] trgp1
  mcaSp
  [Rob,+,-61.5] [CpxR,+,-29.0] [MarA,+,-61.5] [SoxS,+,-61.5] [Fis,+,-81.0] [Cra,-,-72.5] [AcrR,-,-40.5] [MarR,-,17.0,-18.0] marRp
  [FNR,+,-49.5] aerp
  nadCp
  yeiPp
  cpdBp
  [IHF,+,-103.0] [TdcR,+,-195.0] [FNR,+,-148.5,-105.5] [TdcA,+,-177.0] tdcAp
  [CRP,-,17.5] [MalI,-,10.5] malIp
  [CRP,-,-95.5] [CytR,-,-64.5,-83.0] [CRP,-,-42.5] ppiAp2
  [GalS,-,-243.5,-207.5,-107.5,-178.5] [GalR,-,-207.5,-178.5,-243.5,-107.5] [GalS,-,-61.5] [NagC,-,2.0] [GalR,-,-61.5] [GalS,-,136.5] [GalR,-,136.5] galPp
  csiEp
  yeiWp
  [Fur,-,-11.0,-18.0,-5.0,9.0,2.0] fepAp
  cyaRp
  [GalS,-,-61.5] [GalR,-,-61.5] [GalS,-,92.5] [GalR,-,91.5] galSp
  [CRP,-,58.5] yhfAp
  [Cra,-,-55.5] ptsHp1
  [AraC,+,-166.0,-145.0] [AraC,+,-91.0,-70.0] araFp
  [FNR,+,-55.5] caiFp
  [GalS,-,-59.5] [GalR,-,-59.5] mglBp
  [RcsB-BglJ,+,-75.5] bglGp2
  [LexA,-,17.5] sbmCp2
  ychHp
  [HU,-,6.5] [GalS,-,-60.5] [H-NS,-,-18.0,-2.0,-36.0,-47.0] [GalR,-,-60.5] [GalS,-,52.5] [GalR,-,46.5] galEp1
  [Cra,-,-587.5] [Cra,-,95.5] gapAp3
  ykgRp
  [GntR,-,-15.0] gntXp
  [CaiF,+,-151.5,-227.5,-170.5,-208.5] [ArcA,+,-101.0] [FNR,+,-90.5,-41.5] [ArcA,+,-91.0,28.0] [ArcA,+,50.0] caiTp
  mhpRp1
  [ArcA,-,-34.0] [Rob,+,-51.5] [MarA,+,-51.5] [SoxS,+,-51.5] [FNR,-,-40.5] acnAp2
  glgSp1
  gatYp
  [Fis,+,-117.0,-159.0] [ArcA,+,-99.0] [FNR,-,-93.5] [PdhR,-,17.0] [Fis,+,-10.0] [FNR,+,-40.5] [ArcA,+,-82.0] [FNR,-,-40.5] grcAp1
  [IHF,+,-112.5] [ArcA,+,-114.0,-251.0] [NarL,-,-253.0,-270.0,-346.0,-226.0,-235.0,-152.0,-348.0,-286.0,-101.0] [FNR,+,-40.5] [ArcA,+,-6.0] [NarL,-,-37.0,-20.0] focAp1
  ompAp1
  [Cra,-,-36.5] mplp1
  [ArcA,-,-143.0,-119.0,-139.0,-170.0,-113.0] [Fis,-,-171.5] [ArcA,-,-48.0,-57.0] [Fis,-,-73.5,-29.5] acnBp
  [CRP,-,-36.0] csqRp
  [PhoB,-,-4.0,-26.0] ugpBp2
  [GlrR,+,-26.5,-65.5,-90.5] [NtrC,+,-33.5] [RcsB,+,-52.5] rpoEp2b
  raiAp
  [Fis,-,-120.0] [Fis,-,-66.0,-90.0] [Cra,-,-4.5] [Fis,-,72.0] [GlcC,-,47.0] glcCp
  yjhIp
  sdhDp2
  ppdDp
  [Mlc,-,-13.0,-79.0] [NagC,-,4.0,-80.0] [Cra,-,40.5] manXp
  [CRP,-,-94.5] [CytR,-,-82.5,-64.0] [CRP,-,-42.5] [NsrR,-,9.0] cddp
  [GntR,-,-108.5] [IdnR,+,-78.5] [GntR,-,-78.5,-58.5] idnDp
  nupCp
  pkap
  fucPp
  hofMp
  [CytR,-,-31.5,-57.5,-68.5] [CRP,-,-73.5,-40.5] tsxp2
  [MprA,-,-161.0] [IHF,-,-144.0] [OmpR,-,-45.5] nmpCp
  [Lrp,-,-254.0,-206.0,-149.0,-175.0,-279.0,-119.0] [Lrp,-,-81.0,-36.0,-4.0] [Lrp,-,66.0,44.0] dadAp3
  [NagC,-,-125.0] [CRP,-,-61.5,-27.5] [NagC,-,-31.0] nagEp
  [H-NS,-,-67.0,-31.0,6.0,24.0,-5.0,-54.0] [MarA,-,-30.0] [LacI,-,-82.0,11.0] [LacI,-,412.0] lacZp1
  [GlpR,-,-17.5,-58.5,-79.5,-37.5] [GlpR,-,1001.5,1043.5] glpFp
  [Lrp,-,-266.0,-162.0,-136.0,-106.0,-241.0,-193.0] [Lrp,-,10.0,-23.0,-68.0] [Lrp,-,57.0,79.0] dadAp2
  [CytR,-,-22.0] [CRP,-,4.0,-48.0] ycdZp4
  [Lrp,-,-146.0,-225.0,-250.0,-177.0,-120.0] [Lrp,-,-7.0,26.0,-52.0,-90.0] [CRP,-,20.5] [Lrp,-,95.0,73.0] dadAp1
  [Fis,+,-180.0,-116.0] [Fis,+,-68.0,-61.0,-19.0] [FNR,+,-0.5,-40.5] [GlpR,-,-90.5,1.5,-18.5,-50.5] [Fis,+,35.0] [GlpR,-,41.5] glpABCp
  srlAp
  [Fur,-,-100.0] [Fur,-,19.0,13.0,25.0,16.0] [Fur,-,58.0,31.0] entCp
  [MelR,+,-120.5,-100.5] [MelR,-,-238.5] [MelR,+,-62.5,-42.5] [MelR,-,-62.5] melAp
  [PdhR,-,-177.0] [ArcA,-,-200.0] [Fur,-,-213.0] [Cra,-,-268.5] [FNR,-,-192.5] [CusR,+,69.5] [HprR,-,69.5] cyoAp
  [IHF,+,-173.5] [Cra,+,-563.5,-196.5,-227.5] [RcdA,+,-298.5] [CpxR,-,-178.0,-129.5,-166.0,-100.0,-141.0,-186.0,-95.5,-108.5] [CsgD,+,-166.5,-118.5] [MlrA,+,-129.5] [BasR,+,-90.5] [IHF,+,-66.5] [CpxR,-,-21.5,-73.5,3.0,-48.0,-43.0,-52.0] [RstA,-,-50.5] [MqsA,-,-83.5] [BtsR,-,-25.0] [CsgD,+,29.5] [OmpR,+,-49.5] [Cra,+,46.5] [BtsR,-,37.0] csgDp1
  [ExuR,-,-143.5] [ExuR,-,-17.5] exuTp2
  [MelR,+,-194.5] [MelR,-,-116.5,-136.5,-174.5] [MelR,-,2.5] melRp
  [LsrR,-,11.5] lsrAp
  [UxuR,-,-159.5] [ExuR,-,-159.5] [UxuR,-,-53.5] [OxyR,-,-54.0,-32.0] [ExuR,-,-53.5] uxuAp
  [LsrR,-,-18.5] lsrRp
  [CaiF,+,-117.5,-136.5] [FNR,+,-197.5] [CaiF,+,-79.5,-60.5] fixAp
  [Fis,-,-265.0,-98.0] [IHF,-,-180.0,-225.0,-153.0] [Fis,-,-59.0] acsp2
  [RhaS,+,-40.0,-73.0] rhaBp
  [GntR,-,-103.5] [IdnR,+,-83.5] [GntR,-,-83.5,-53.5] idnKp
  dsdXp
  [MqsA,-,-132.5] [MqsA,-,101.5] cspDp
  [RhaR,+,-40.0,-74.0] [RhaS,+,-40.0,-74.0] [RhaS,?,915.0] rhaSp
  [CRP,-,-104.5] [NagC,-,-101.0] [CRP,-,-70.5] [NagC,-,-7.0] nagBp
  [MalI,-,-16.5] malXp
  [Fis,-,-119.0,-145.0] [ArcA,-,-85.0,-48.0,2.0] [Mlc,-,-6.0] [Fis,-,-80.0,3.0,-19.0] [SoxS,+,-83.5] [Fis,+,-19.0,3.0] ptsGp1
  [DeoR,-,-887.0,-308.0] [CRP,-,-93.5] [Fis,+,-102.0] [CytR,-,-87.5,-70.5,-61.0] [DeoR,-,-8.0] [ModE,-,-35.0] deoCp2
  [CRP,-,-93.5] [CytR,-,-70.5,-61.0,-87.0] udpP
  [IHF,+,-114.0] [Fis,-,-143.0,-221.0,-101.0] [Fis,-,26.0,-83.0,-42.0] [CRP,-,-63.0] dusBp
  [MalT,+,-207.5,-231.5,-197.5] [Fis,+,-116.0] [MalT,+,-41.5,-51.5] [CreB,-,18.5] [Fis,+,52.0] malEp
  [Cra,-,-22.5] [Fis,-,137.0] mtlAp
  [Fis,+,-113.0,-166.0] [FNR,+,-131.5] [GlpR,-,-113.5,-172.5,-132.5] [Fis,+,-16.0,-64.0,-71.0] [FNR,+,-91.5] [GlpR,-,-41.5,-81.5] [Fis,+,49.0] [GlpR,-,315.5,348.5,333.5] [IHF,-,202.0,35.0] glpTQp
  [UxuR,-,-130.5] [OxyR,-,-152.0,-130.0] [UxuR,-,-24.5] gntPp
  [IHF,+,-108.0] [OmpR,-,-370.5] [CpxR,-,-373.0,-429.5,-93.0] [IHF,-,-176.0] [OmpR,-,-50.5,-70.5] [CpxR,-,-68.5] [RstA,-,-92.0] [OmpR,+,-90.5,-50.5,-70.5] [IHF,-,-62.0] ompFp
  [CRP,-,-94.5] [CytR,-,-73.5,-54.5] [CRP,-,-41.5] rpoHp5
  [BtsR,-,-188.0,-203.0] [Cra,-,-185.5] [PdhR,-,19.0] [FNR,+,-50.5] [FNR,-,-50.5] pdhRp
  [CytR,-,-53.0,-76.5,-61.0] [CRP,-,-40.5,-92.5] [CRP,-,56.5] nupGp
  fumAp
  grpEp
  agpp
  [PhoP,+,-161.0] [MalT,+,-74.5,-61.5,-37.5] malSp
  [ZraR,+,-115.0] [ZraR,+,-86.0] zraSp
  [Fis,-,-82.0,-75.0,22.0] [XylR,+,-61.5,-40.5] xylFp
  [ArgR,-,-125.5] [ArgR,-,-6.5,15.5] argGp
  [HyfR,+,-129.5] [FhlA,+,-130.0] [FNR,-,-105.5] hyfAp
  [Fur,-,12.0,3.0,-6.0] fiup
  [PhoP,+,-191.5] [OmpR,-,-149.5] [ArcA,-,-38.0] [FadR,-,-17.0,9.0] [OmpR,-,-60.5] [OmpR,-,119.5,69.5] fadLp
  [ArgP,+,-190.5,-163.5,-334.5,-281.5,-218.5,-244.5] [H-NS,-,-415.0,-439.0] [Fis,+,-199.0,-323.0,-128.0,-269.0,-156.0] [DnaA,-,-14.0] [DnaA,+,-36.5,-48.0] [NrdR,-,-7.5,25.5] nrdAp
  [IHF,+,-80.0] [PaaX,-,-6.5] paaZp
  [BtsR,+,-62.0] yjiYp
  [Fis,+,-81.0,-41.0] proPp2
  ompRp3
  [PurR,-,-24.5] [Fis,-,-11.0,29.0,8.0] [DnaA,-,248.0] guaBp
  [DgoR,-,-110.0] [DgoR,-,-88.5] dgoRp
  [GntR,-,-58.5] [GntR,-,83.5] gntTp3
  rmfp
  [GntR,-,-55.5] [GntR,-,86.5] gntTp2
  [PhoB,-,-17.0] [QseB,-,-3.0] [NsrR,-,2.0] [Nac,+,-32.5] feaRp2
  [ArcA,-,-47.0] [IHF,+,-70.0] gltAp1
  [PrpR,+,-147.5,-113.5] [Cra,-,-101.5] prpBp
  [NarL,-,-109.0] [FNR,+,-45.5] [NarL,-,-45.0,24.0,2.0,19.0] [NarL,-,43.0] dcuBp
  [ExuR,-,-127.5] [ExuR,-,-25.5,-1.5] [ExuR,-,54.5] uxaCp
  [IHF,+,-49.5] [YiaJ,-,-1.0] [CRP,?,62.5] yiaKp
  [UhpA,+,-41.5,-64.5] uhpTp
  [ArcA,-,-38.0,-10.0,-21.0] [Rob,+,-40.5] [SoxR,+,9.0] [Fur,-,-30.0,-33.0,-42.0,-36.0] [MarA,+,-40.5] [SoxS,+,-44.0] [IHF,-,-48.0,-68.0,-24.0,-1.0] [FNR,-,-37.5] sodAp
  [AscG,-,-108.5] [CRP,-,-97.5] ybiTp
  [MhpR,+,-58.0] mhpAp
  rpsFp
  [ExuR,-,-146.5] uxaBp
  [AraC,+,-65.0,-44.0] araEp
  [ArcA,-,-173.0,-156.0,-184.0] [RhaS,?,-499.0] [RhaS,+,-74.0,-41.0] rhaTp
  [AraC,-,-117.0,-138.0,-275.0] [AraC,-,-64.0] [AraC,+,-64.0,-43.0] araBp
  [Lrp,+,-161.0] [GcvA,-,-226.0,-258.0] [GcvA,+,-258.0,-226.0] [PurR,-,7.5] [GcvA,-,-66.0,-44.0] gcvTp
  [MalT,+,-220.5,-230.5] [MalT,+,-74.5,-64.5,-40.5] malKp
  [UxuR,-,132.5] [ExuR,-,132.5] lgoRp4

  

  

RegulonDB