RegulonDB RegulonDB 10.8: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by CRP,- regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


CRP,- Regulatory phrases      

CRP,- phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      casAp
      serCp
      spfp
      yaeQp
      gltBp
      cytRp
      ldtBp
      gadBp
      dusBp
      gadAp
      metKp
      mlcp1
      ompRp1
      ompWp
      galEp2
      bhsAp
      csqRp
      ptsHp2
      proPp1
      gdhAp1
      gcdp1
      aceBp
      psiEp
      trxAp1
      gadEp
      metYp2
      yaePp
      lpdAp
      ompRp4
      aaeRp
      cyaAp
      narQp
      sohBp2
      ampD
      citCp2
      treBp
      ppiAp4
      pckp
      malIp
      sohBp1
      dadAp1
      xseAp
      rpoHp4
      rpoHp3
      tsxp2
      nagEp
      ppiAp3
      glnAp2
      azuCp
      ycdZp4
      lacZp3
      manAp
      osmYp
    nirBp
    pncBp
    nagBp
    ppiAp2
    cddp
    rpoHp5
    putPp4
    rpoSp
    lacZp2
    nupGp
      rplMp
      comRp
      exuRp2
      ybiTp
      hfqp3
      udpP
      deoCp2
      csrCp
      crpp1
      araJp
      dpiBp
      yiaJp
      yhfAp
      puuDp
      sodBp


CRP,- phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [LeuO,+,-110.0] [LeuO,+,-80.0,21.0] [H-NS,-,-46.0] [SlyA,+,81.5] [LeuO,+,47.0] casAp
  [Lrp,+,-134.0] serCp
  spfp
  yaeQp
  [Lrp,+,-246.0,-215.0,-108.0,-152.0] [ArgR,-,-331.5,-352.0] [GadE,+,-284.0] [IHF,+,-89.0,-85.0] [FNR,-,-26.5] gltBp
  [CytR,-,-59.0,-43.0,-22.0] [CRP,+,-64.5] cytRp
  [CRP,+,-63.5] ldtBp
  [GadW,-,-98.5,-231.5,-119.5,-210.5] [GadX,+,-231.5,-98.5,-210.5,-268.0,-184.0,-119.5] [Fis,-,-105.0] [GadW,+,-231.5,-210.5,-98.5,-119.5] [GadX,+,-17.5,-39.5] [GadE,+,-62.5] [Fis,-,-27.0,-59.0] [RcsB,+,-64.5] [Fis,-,37.0] gadBp
  [IHF,+,-114.0] [CRP,+,-167.5,-252.5] [Fis,-,-143.0,-221.0,-101.0] [CRP,+,-63.0] [Fis,-,26.0,-83.0,-42.0] dusBp
  [TorR,-,-122.5] [GadW,-,-121.5,-100.5] [GadX,+,-100.5,-121.5] [Fis,-,-118.0,-147.0,-94.0] [GadW,+,-121.5,-100.5] [GadRcs,+,-62.5] [GadW,-,-78.0,-57.5] [RcsB,-,-18.5] [GadX,+,-57.5,-10.5,-31.5,-78.0] [Fis,-,-18.0] [GadW,+,-57.5,-78.0] [FNR,-,11.5] [TorR,-,73.5] gadAp
  [MetJ-S-adenosylmethionine,-,-14.5,-2.5] metKp
  [Mlc,-,16.0] mlcp1
  [IHF,-,-102.0] [IHF,-,-37.0,8.0] ompRp1
  [FNR,-,-126.5] [ArcA,-,1.5] [FNR,+,-81.5] [NarL,-,-18.5] ompWp
  [GalS,+,-55.5] [GalR,+,-55.5] [HU,-,6.5] [GalS,-,-55.5] [GalR,-,-55.5] [GalS,-,57.5] [GalR,-,51.5] galEp2
  bhsAp
  [CRP,+,-36.0] csqRp
  [Cra,+,-48.5] ptsHp2
  proPp1
  [ArgP,+,-79.5,-59.5] [Nac,-,-81.0,-25.0] [Nac,-,45.0] gdhAp1
  [IHF,+,-73.0] gcdp1
  [IHF,+,-159.0] [IclR,-,-104.0,-131.0,-122.0,-141.0] [Cra,+,-166.5] [IHF,+,-72.0] [IclR,-,-53.0,-38.0,-26.0] aceBp
  [PhoB,+,-53.0,-31.0] psiEp
  trxAp1
  [GadX,+,-574.5,-595.5] [GadE,+,-198.5] [GadW,+,-574.5,-595.5] [GadE,+,-30.5,-63.5] [FliZ,-,9.5] gadEp
  [ArgR,-,-201.5,-180.5] [ArgR,-,-61.5] metYp2
  yaePp
  [ArcA,-,-18.0,-27.0] [Fis,+,-29.0] lpdAp
  ompRp4
  aaeRp
  cyaAp
  narQp
  sohBp2
  ampD
  [DpiA,+,-48.0,-21.0,-90.0] [FNR,-,11.5] [NarL,-,37.0] citCp2
  [ArcA,+,-237.0] [CRP,?,-60.5] [TreR,-,-81.0,-48.0] treBp
  [CytR,-,-10.5,-29.0] ppiAp4
  [Cra,+,-139.5] [DcuR,+,-13.0,-64.0] [CRP,+,-90.5] pckp
  [CRP,+,-43.5] [MalI,-,10.5] malIp
  sohBp1
  [Lrp,-,-146.0,-225.0,-250.0,-177.0,-120.0] [CRP,+,-43.5,20.5] [Lrp,-,-7.0,26.0,-52.0,-90.0] [Lrp,-,95.0,73.0] dadAp1
  [MarA,+,-42.0] xseAp
  [CytR,-,-59.0,-40.5] [DnaA,-,-55.0,-31.0] rpoHp4
  [CytR,-,-33.5,-52.0] [DnaA,-,-48.0] rpoHp3
  [CytR,-,-31.5,-57.5,-68.5] [CRP,+,-73.5,-40.5] tsxp2
  [NagC,-,-125.0] [NagC,-,-31.0] [CRP,+,-27.5,-61.5] nagEp
  [CytR,-,-29.5,-48.0] [CRP,+,-60.5] ppiAp3
  [NtrC,+,-140.0,-108.0] [NtrC,+,-68.0,-89.0,-45.0] [Fis,+,-55.0] glnAp2
  azuCp
  [CytR,-,-22.0] [CRP,+,4.0,-48.0] ycdZp4
  lacZp3
  [CRP,+,-64.0] manAp
  [Lrp,-,-186.0,-149.0] [IHF,-,-96.5] [IHF,-,-5.0] [Fis,-,-10.0] [Fis,-,72.0] osmYp
  [IHF,+,-115.0] [Fis,-,-97.0,-142.0] [NarP,+,-65.0,-74.0] [NarL,+,-65.0,-74.0] [FNR,+,-41.5] [Cra,-,-15.5] [IHF,-,-88.0] [Fis,-,23.0] nirBp
  [NadR,-,20.5] pncBp
  [NagC,-,-101.0] [CRP,+,-104.5] [NagC,-,-7.0] [CRP,+,-70.5] nagBp
  [CytR,-,-64.5,-83.0] [CRP,+,-42.5] ppiAp2
  [CytR,-,-82.5,-64.0] [NsrR,-,9.0] [CRP,+,-92.5,-42.5] cddp
  [CRP,+,-94.5] [CytR,-,-73.5,-54.5] [CRP,+,-41.5,-48.5] rpoHp5
  putPp4
  [MqsA,-,-147.0] [ArcA,-,24.0,-64.0] rpoSp
  lacZp2
  [CytR,-,-53.0,-76.5,-61.0] [CRP,+,-92.5,-42.5] [CRP,+,56.5] nupGp
  [Fis,-,-17.0] rplMp
  comRp
  [UxuR,-,-193.5] [ExuR,-,-193.5] [ExuR,-,-4.5] exuRp2
  [CRP,+,-97.5] [AscG,-,-108.5] ybiTp
  hfqp3
  [CRP,+,-93.5] [CytR,-,-70.5,-61.0,-87.0] [CRP,+,-41.5] udpP
  [CRP,+,-93.5] [Fis,+,-102.0] [DeoR,-,-887.0,-308.0] [CytR,-,-87.5,-70.5,-61.0] [CRP,+,-40.5] [DeoR,-,-8.0] [ModE,-,-35.0] deoCp2
  [UvrY,+,-159.0] csrCp
  [CRP,+,-59.5] [Fis,-,-92.0] [Cra,+,-45.5] [Fis,-,31.0,69.0,49.0] crpp1
  [CRP,+,-90.5] [AraC,+,-64.0,-43.0] araJp
  [ArcA,+,-95.5] [NarL,-,20.0] [DpiA,+,77.0,104.0,146.0] [FNR,-,45.5] dpiBp
  [IHF,-,-4.0] [YiaJ,-,-55.0] yiaJp
  [CRP,+,-42.5] yhfAp
  [PuuR,-,-94.5] [PuuR,-,1.5] [ArcA,-,82.0] [PuuR,-,43.5,78.5] puuDp
  [NsrR,-,-37.0] [IHF,-,-61.0] sodBp

  

  

RegulonDB