RegulonDB RegulonDB 10.8: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by FNR,- regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


FNR,- Regulatory phrases      

FNR,- phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      arcAp3
      pdhRp
      nuoAp2
      acnAp2
      sodAp
      yeiLp
      gltBp
      hemAp1
      tpxp
      aldAp
      fnrp
      ubiCp
      hmpp
      citCp2
      gadAp
      puuAp
      cydAp3
      cydAp1
    cydAp4
    ndhp
    grcAp1
  narXp
      purMp
      cyoAp
      dppAp
      gadXp
      norVp
      ompWp
      cydAp2
      hyfAp
      fdnGp
      moeAp
      dpiBp


FNR,- phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  arcAp3
  [BtsR,-,-188.0,-203.0] [CRP,+,-377.5,-110.5] [Cra,-,-185.5] [PdhR,-,19.0] [CRP,+,-50.5,-62.5,-70.5,-82.5] [FNR,+,-50.5] pdhRp
  [ArcA,-,-108.0] [NarL,+,-122.0] [IHF,-,-83.0,-74.0,-66.0] nuoAp2
  [ArcA,-,-34.0] [SoxS,+,-51.5] [Rob,+,-51.5] [CRP,+,-40.5] [MarA,+,-51.5] acnAp2
  [CRP,+,-99.5] [ArcA,-,-38.0,-10.0,-21.0] [SoxS,+,-44.0] [Rob,+,-40.5] [SoxR,+,9.0] [Fur,-,-30.0,-33.0,-42.0,-36.0] [IHF,-,-48.0,-68.0,-24.0,-1.0] [MarA,+,-40.5] sodAp
  [IHF,+,-227.0,-193.0] [Lrp,+,-120.0] yeiLp
  [Lrp,+,-246.0,-215.0,-108.0,-152.0] [ArgR,-,-331.5,-352.0] [GadE,+,-284.0] [IHF,+,-89.0,-85.0] [CRP,-,-65.5] gltBp
  hemAp1
  [ArcA,-,-22.0] tpxp
  [ArcA,-,-157.0,-137.0] [SoxS,+,-161.0] [Rob,+,-161.0] [MarA,+,-161.0] [ArcA,-,2.0,-5.0,13.0] [DnaA,-,-7.5] [CRP,+,-59.5] aldAp
  [IHF,+,-104.0] fnrp
  [IHF,-,-12.0] ubiCp
  [MetR,+,-80.0] [NsrR,-,20.0,2.0,-38.0] [Fur,-,6.0] hmpp
  [CRP,-,11.5] [DpiA,+,-48.0,-21.0,-90.0] [NarL,-,37.0] citCp2
  [TorR,-,-122.5] [GadW,-,-121.5,-100.5] [GadX,+,-100.5,-121.5] [Fis,-,-118.0,-147.0,-94.0] [GadW,+,-121.5,-100.5] [GadRcs,+,-62.5] [GadW,-,-78.0,-57.5] [RcsB,-,-18.5] [GadX,+,-57.5,-10.5,-31.5,-78.0] [Fis,-,-18.0] [CRP,-,-62.5] [GadW,+,-57.5,-78.0] [TorR,-,73.5] gadAp
  [ArcA,-,-165.0] [PuuR,-,-126.5,-161.5] [PuuR,-,-84.5,11.5] puuAp
  cydAp3
  [ArcA,+,-304.0,-315.0,-293.0] [ArcA,+,-84.0] [ArcA,+,135.0] cydAp1
  cydAp4
  [Fis,+,-123.0] [PdhR,-,-35.0] [NsrR,-,6.0] [ArcA,-,-57.0] [Fis,+,-72.0] [IHF,-,-58.0,26.0,-17.0] [ArcA,-,68.0,52.0,57.0,36.0,66.0] [Fis,-,51.0] ndhp
  [Fis,+,-117.0,-159.0] [ArcA,+,-99.0] [PdhR,-,17.0] [CRP,+,-40.5] [Fis,+,-10.0] [FNR,+,-40.5] [ArcA,+,-82.0] grcAp1
  [ModE,+,-141.5] narXp
  [PurR,-,-27.5] purMp
  [PdhR,-,-177.0] [ArcA,-,-200.0] [CRP,+,-191.5] [Fur,-,-213.0] [Cra,-,-268.5] [CRP,+,-37.5] [HprR,-,69.5] [CusR,+,69.5] cyoAp
  [IHF,+,1848.0] dppAp
  [RutR,-,-824.5] gadXp
  [NorR,+,-132.0,-111.0] [IHF,+,-48.0] [NorR,+,-87.0] [IHF,-,17.0] [NarP,-,-78.0,-69.0] [NarL,-,-69.0,-78.0] norVp
  [ArcA,-,1.5] [FNR,+,-81.5] [NarL,-,-18.5] [CRP,-,-42.5] ompWp
  [FNR,+,-167.5] [ArcA,+,-77.5] cydAp2
  [CRP,+,-160.5] [HyfR,+,-129.5] [FhlA,+,-130.0] hyfAp
  [NarL,+,-109.0,-100.0,-124.0] [FNR,+,-97.5] [NarP,-,-109.0,-100.0] [NarL,+,-77.0] [FNR,+,-42.5] fdnGp
  [NarL,+,-177.0,-109.0] [ArcA,+,-137.0] moeAp
  [ArcA,+,-95.5] [NarL,-,20.0] [CRP,-,45.5] [DpiA,+,77.0,104.0,146.0] dpiBp

  

  

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