RegulonDB RegulonDB 10.8: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by Fis,+ regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


Fis,+ Regulatory phrases      

Fis,+ phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      marRp
      alaWp
      proKp
      aspVp
      serXp
      metYp1
      argXp
      pheVp
      leuXp
      lysTp
      pheUp
      argWp
      leuQp
      flxAp
      glyUp
      metTp
      thrWp
      proLp
      argUp
      serTp
      queAp
      glnAp2
      mazEp2
      trmAp
      mazEp1
      lpdAp
      fadBp
      proPp2
      ptsGp1
    trgp1
    ndhp
    grcAp1
    rnpBp
    carAp1
    rrsBp1
    tyrTp
    rrsCp1
    valUp
    rrsEp
    topAp1
    adhEp1
    thrUp
    rrsGp1
    rrsHp1
    rrsAp1
    rrsDp1
    hnsp
  cspAp1
  glpABCp
  glpTQp
      deoCp2
      nuoAp1
      hupAp
      nrdAp
    malEp


Fis,+ phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [SoxS,+,-61.5] [Rob,+,-61.5] [CRP,+,-52.5] [Cra,-,-72.5] [AcrR,-,-40.5] [CpxR,+,-29.0] [MarR,-,17.0,-18.0] [MarA,+,-61.5] marRp
  alaWp
  proKp
  aspVp
  serXp
  metYp1
  argXp
  pheVp
  leuXp
  lysTp
  pheUp
  argWp
  leuQp
  flxAp
  glyUp
  metTp
  thrWp
  proLp
  argUp
  serTp
  queAp
  [NtrC,+,-140.0,-108.0] [NtrC,+,-68.0,-89.0,-45.0] [CRP,-,-57.5,-55.5] glnAp2
  [MazE,-,-20.0,-34.0] [MazEF,-,-34.0,-20.0] mazEp2
  trmAp
  [MazE,-,-21.0,-7.0] [MazEF,-,-21.0,-7.0] mazEp1
  [ArcA,-,-18.0,-27.0] [CRP,-,-18.5] lpdAp
  [ArcA,-,-29.0] [FadR,-,9.0] fadBp
  [CRP,+,-122.5] proPp2
  [CRP,+,-94.5] [Fis,-,-119.0,-145.0] [ArcA,-,-85.0,-48.0,2.0] [SoxS,+,-83.5] [CRP,+,-40.5] [Mlc,-,-6.0] [Fis,-,-80.0,3.0,-19.0] ptsGp1
  [CRP,+,-52.5] trgp1
  [FNR,-,-94.5] [PdhR,-,-35.0] [NsrR,-,6.0] [ArcA,-,-57.0] [IHF,-,-58.0,26.0,-17.0] [FNR,-,-50.5] [ArcA,-,68.0,52.0,57.0,36.0,66.0] [Fis,-,51.0] ndhp
  [ArcA,+,-99.0] [FNR,-,-93.5] [PdhR,-,17.0] [CRP,+,-40.5] [FNR,+,-40.5] [ArcA,+,-82.0] [FNR,-,-40.5] grcAp1
  [Fis,-,11.0] rnpBp
  [PurR,-,-128.5] [IHF,+,-305.0] [RutR,+,-184.0] [PepA,-,-173.0] [IHF,-,-305.0] [PepA,-,-79.0] carAp1
  [H-NS,-,-83.0,-50.0,-26.0] [Lrp,-,-53.0] [Lrp,-,269.0,75.0] rrsBp1
  tyrTp
  rrsCp1
  valUp
  rrsEp
  [Fis,-,-10.0,-30.0,20.0] topAp1
  [Lrp,-,-157.0] [Lrp,-,-65.0,-6.0] [Cra,-,36.5] [NarL,-,90.0,81.0] adhEp1
  thrUp
  rrsGp1
  rrsHp1
  [Lrp,-,-73.0,-53.0] rrsAp1
  rrsDp1
  [H-NS,-,-182.0,-113.0] [H-NS,-,-40.0] hnsp
  [H-NS,-,-105.5,-143.5] [H-NS,-,23.5,-9.5,-58.0] cspAp1
  [CRP,+,-90.5,-40.5,-0.5] [FNR,+,-0.5,-40.5] [GlpR,-,-90.5,1.5,-18.5,-50.5] [GlpR,-,41.5] glpABCp
  [CRP,+,-131.5] [FNR,+,-131.5] [GlpR,-,-113.5,-172.5,-132.5] [CRP,+,-41.5,-91.5] [FNR,+,-91.5] [GlpR,-,-41.5,-81.5] [GlpR,-,315.5,348.5,333.5] [IHF,-,202.0,35.0] glpTQp
  [CRP,+,-93.5] [DeoR,-,-887.0,-308.0] [CRP,-,-93.5] [CytR,-,-87.5,-70.5,-61.0] [CRP,+,-40.5] [DeoR,-,-8.0] [ModE,-,-35.0] deoCp2
  nuoAp1
  [CRP,+,-63.5] hupAp
  [H-NS,-,-415.0,-439.0] [CRP,+,-136.5] [ArgP,+,-190.5,-163.5,-334.5,-281.5,-218.5,-244.5] [DnaA,-,-14.0] [DnaA,+,-36.5,-48.0] [NrdR,-,-7.5,25.5] nrdAp
  [MalT,+,-207.5,-231.5,-197.5] [CRP,+,-171.5,-139.5,-105.5] [MalT,+,-41.5,-51.5] [CRP,+,-76.5] [CreB,-,18.5] malEp

  

  

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