RegulonDB RegulonDB 10.8: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by IHF,+ regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


IHF,+ Regulatory phrases      

IHF,+ phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      uspAp1
      paaZp
      gcdp1
      gltAp1
      folAp
      yiaKp
      norVp
      dcuDp2
      pspAp
      hycAp
      pspGp
      ibpBp
      pstSp
      gltBp
      rtcBp
      atoDp
    csgDp1
    glmYp1
    aceBp
    glnHp2
    ilvLp2
    fimAp
    proVp3
      fimBp2
      rpoHp6
      carAp1
      sufAp
      yjbEp1
      narKp1
      hypAp
      nrfAp
      narGp
      cysJp
      hipBp
      nirBp
      paaAp
      dusBp
      focAp1
      ompFp
      glcDp
      fnrp
      tdcAp
      csrBp
      dpsp
      yeiLp
      ssuEp
      dppAp


IHF,+ phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [FadR,-,5.0] [FadR,-,97.0] uspAp1
  [CRP,+,-136.5] [PaaX,-,-6.5] paaZp
  [CRP,-,-31.5] gcdp1
  [CRP,+,-107.5] [ArcA,-,-47.0] gltAp1
  [TyrR,+,-106.0,-148.5] folAp
  [CRP,+,-105.5] [YiaJ,-,-1.0] [CRP,?,62.5] yiaKp
  [NorR,+,-132.0,-111.0] [FNR,-,-140.5] [NorR,+,-87.0] [IHF,-,17.0] [NarP,-,-78.0,-69.0] [NarL,-,-69.0,-78.0] norVp
  dcuDp2
  [PspF,+,-99.0,-119.0] pspAp
  [ModE,+,-192.0] [FhlA,+,-98.0] [NsrR,-,-70.0] [FhlA,+,-84.5] hycAp
  [PspF,+,-87.0] pspGp
  ibpBp
  [PhoB,+,-54.0,-32.0] pstSp
  [Lrp,+,-246.0,-215.0,-108.0,-152.0] [ArgR,-,-331.5,-352.0] [GadE,+,-284.0] [CRP,-,-65.5] [FNR,-,-26.5] gltBp
  rtcBp
  [AtoC,+,-119.5,-138.5] atoDp
  [RcdA,+,-298.5] [CpxR,-,-178.0,-129.5,-166.0,-100.0,-141.0,-186.0,-95.5,-108.5] [CRP,+,-170.5] [CsgD,+,-166.5,-118.5] [MlrA,+,-129.5] [Cra,+,-563.5,-196.5,-227.5] [BasR,+,-90.5] [CpxR,-,-21.5,-73.5,3.0,-48.0,-43.0,-52.0] [RstA,-,-50.5] [MqsA,-,-83.5] [BtsR,-,-25.0] [CRP,+,-42.5] [CsgD,+,29.5] [OmpR,+,-49.5] [BtsR,-,37.0] [Cra,+,46.5] csgDp1
  [GlrR,+,-188.5,-221.5,-125.5] glmYp1
  [IclR,-,-104.0,-131.0,-122.0,-141.0] [Cra,+,-166.5] [IclR,-,-53.0,-38.0,-26.0] [CRP,-,-30.5] aceBp
  [NtrC,+,-122.0,-109.0] [NtrC,-,-135.0] [NtrC,-,-79.0] glnHp2
  [Lrp,-,167.5,232.0,200.0] ilvLp2
  [Lrp,+,204.0,173.0,235.0] fimAp
  [H-NS,-,7.0,-33.0,26.0] [H-NS,-,100.0,84.0,130.0,45.0,156.0,170.0,72.0] proVp3
  [NanR,+,-736.5,-727.5,-744.5] [NagC,+,-674.0,-462.0] [BasR,+,-41.5] fimBp2
  rpoHp6
  [PurR,-,-128.5] [RutR,+,-184.0] [Fis,+,-156.0,-103.0] [PepA,-,-173.0] [IHF,-,-305.0] [Fis,+,-81.0] [PepA,-,-79.0] carAp1
  [OxyR,+,-232.0,-210.0] [IscR,+,-145.5,-104.5] [NsrR,-,-6.0,-68.0] [Fur,-,-18.0] [IscR,+,-42.5] sufAp
  [RcsAB,+,-209.0] yjbEp1
  [NarL,+,-194.0,-154.0,-214.0,-160.0,-103.0,-177.0,-98.0] [NarL,+,-67.0,-90.0,-80.0] [FNR,+,-41.5,-79.5] [Fis,-,-43.0] narKp1
  [NsrR,-,-96.0] [FhlA,+,-751.5,-720.5] hypAp
  [NsrR,-,-121.0] [NsrR,-,-63.0] [NarP,+,-70.0,-79.0] [NarL,+,-79.0,-50.0,-70.0] [FNR,+,-41.5] [IHF,-,-55.0] [NarL,-,-22.0,-50.0] [Fis,-,-15.0] nrfAp
  [NarL,+,-101.0,-195.0,-208.0,-185.0] [RstA,+,-276.0] [Fis,-,-103.0] [NarL,+,-79.0,-71.0,-57.0,-89.0] [FNR,+,-41.5] [Fis,-,-66.0] narGp
  [CysB,+,-55.0] cysJp
  [HipAB,-,-85.5,-18.5,-57.5,10.5] [HipB,-,-57.5,10.5,-18.5,-85.5] hipBp
  [Fis,-,-97.0,-142.0] [CRP,-,-296.5] [NarP,+,-65.0,-74.0] [NarL,+,-65.0,-74.0] [FNR,+,-41.5] [Cra,-,-15.5] [IHF,-,-88.0] [Fis,-,23.0] [CRP,-,-41.5] nirBp
  [SlyA,+,-177.5] [SlyA,+,-19.5,-74.5] [CRP,+,-58.5] [PaaX,-,30.0] paaAp
  [CRP,+,-167.5,-252.5] [Fis,-,-143.0,-221.0,-101.0] [CRP,+,-63.0] [Fis,-,26.0,-83.0,-42.0] [CRP,-,-63.0] dusBp
  [ArcA,+,-114.0,-251.0] [NarL,-,-253.0,-270.0,-346.0,-226.0,-235.0,-152.0,-348.0,-286.0,-101.0] [CRP,+,-40.5] [FNR,+,-40.5] [ArcA,+,-6.0] [NarL,-,-37.0,-20.0] focAp1
  [OmpR,-,-370.5] [CpxR,-,-373.0,-429.5,-93.0] [CRP,+,-121.5] [IHF,-,-176.0] [OmpR,-,-50.5,-70.5] [CpxR,-,-68.5] [RstA,-,-92.0] [CRP,+,-52.5,-92.5] [OmpR,+,-90.5,-50.5,-70.5] [IHF,-,-62.0] ompFp
  [ArcA,-,-104.0,-111.0] [GlcC,+,-176.0] [PdhR,-,-56.0] glcDp
  [FNR,-,-0.5] fnrp
  [TdcR,+,-195.0] [FNR,+,-148.5,-105.5] [TdcA,+,-177.0] [CRP,+,-43.5] tdcAp
  [UvrY,+,-183.0] csrBp
  [MntR,-,-17.5] [H-NS,-,3.5] [OxyR,+,-66.0,-17.0,-44.0] [Fis,-,-10.0,-26.0] dpsp
  [Lrp,+,-120.0] [FNR,-,-28.5] yeiLp
  [Cbl,+,-54.5] [CysB,-,-18.0] [IHF,-,33.0] ssuEp
  [FNR,-,-162.5] dppAp

  

  

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